| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2157 |
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| Symbol | |
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| ID | 5612021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2609805 |
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| End bp | 2611262 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640933061 |
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| Product | cobyric acid synthase |
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| Protein accession | YP_001473894 |
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| Protein GI | 157375294 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1492] Cobyric acid synthase |
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| TIGRFAM ID | [TIGR00313] cobyric acid synthase CobQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.711251 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGAT ATAAATTGAT GGTGCAAGGC ACCACCAGTG ATGCAGGTAA AAGCGTTATG
GTTGCCGGGC TTTGCCGGGT TCTGGCACGT AAAGGTATCG CCGTGGCCCC TTTCAAGCCG
CAAAATATGG CACTCAACAG CGCCGTCACC CCCGATGGCG GCGAGATTGG CCGAGCCCAG
GCTGTACAAG CGCAGGCCTG CAACCTCCCC TTGAGCGTGC ATATGAATCC GGTACTGCTT
AAACCCAATA CCGATACGGG GGCTCAGGTG ATCATTCGCG GCAAGGCCAT AGAGGATATG
GATGCCGTCA GTTACCACAC CTTTAAACCC CAACTGCTCG AGATGGTATT AGAAAGTTTC
GAGTTCCTGG GAAAAGGTAT GCAGGCCAGA TTGGTCGAAG GCGCGGGTAG CCCTGCAGAA
GTTAATCTTC GCGAACACGA TATTGCCAAC ATGGGCTTTG CGCTAGCGGC AAAGACGCCT
GTGGTGATCG TTGCCGACAT CGACAGAGGC GGCGTTTTCG CGCACCTCTA TGGCACATTC
GATCTTCTGT CCGATGAAGA GAAGCTGTTG GTTAAGGGCT TTATCATCAA CCGTTTCCGA
GGCGATGTCA CCCTACTGGA AAGCGGCCTT ACCTGGCTCA CCGAAAAAAC CGGCGTGCCT
GTGCTGGGCG TTGTGCCCTA TCTGCATGGT CTGTATCTGG AGGCGGAAGA TGCCATCAAT
CAGCAGCAGC TCGATGATGA TACCCATTTT AAGATCGTCG TTCCCGGCCT GCCACGAATA
AGTAATCATA CCGATTTTGA TGCCCTGAGA CTTCACCCCG GTGTCGATCT CTGCTTTGTT
AAGCCCGGTG ATGATCTGCC GCCTGCAGAC TTAATTATTC TCCCCGGATC CAAGAGTGTC
CGCGGCGATC TAATGGCGCT CAGAGATCGC GGATGGGACA AGCAGATCGC TCGTCATCTT
AGATTTGGCG GAAAGTTGAT CGGGATCTGT GGCGGCTATC AGATGCTCGG TCGCAGCATT
GATGATCCCC ATGGCGTCGA AGGAGAACAG GGCAATAGTG AAGGGCTTGG CTATCTCAAC
GTTACAACCA CTCTTGATAC TCAAAAAACC TTAAAACAGG TAAGTGGTGA ACTGCAGCTG
AATGGCAAAA CTCATCCGGT TACAGGCTAC GAGATACATG CCGGTGTCAG TGAGGTAAAT
GAATTGCAAC CTGTTACTTT AAATGGCCAG CTCGACGGCG CACTAGGTTG TGACAATCAA
GTACTGGGTA GTTACCTGCA TGGCATCTTC GATGAGCCAG ACGCCTGTAA TGCACTGCTC
AATTGGGCAG GCTACCAGCA ACAAAAAGCA CAGGATATGT CGGCGCTCAG AGAAGAGAAC
CTTAACCGGC TCGCCGATAG TCTGGAGGAG TCGTTAGATC TTGATTCGTT GTTTAGCGGC
ATCGAGGGCT GGCGCTAA
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| Protein sequence | MSGYKLMVQG TTSDAGKSVM VAGLCRVLAR KGIAVAPFKP QNMALNSAVT PDGGEIGRAQ
AVQAQACNLP LSVHMNPVLL KPNTDTGAQV IIRGKAIEDM DAVSYHTFKP QLLEMVLESF
EFLGKGMQAR LVEGAGSPAE VNLREHDIAN MGFALAAKTP VVIVADIDRG GVFAHLYGTF
DLLSDEEKLL VKGFIINRFR GDVTLLESGL TWLTEKTGVP VLGVVPYLHG LYLEAEDAIN
QQQLDDDTHF KIVVPGLPRI SNHTDFDALR LHPGVDLCFV KPGDDLPPAD LIILPGSKSV
RGDLMALRDR GWDKQIARHL RFGGKLIGIC GGYQMLGRSI DDPHGVEGEQ GNSEGLGYLN
VTTTLDTQKT LKQVSGELQL NGKTHPVTGY EIHAGVSEVN ELQPVTLNGQ LDGALGCDNQ
VLGSYLHGIF DEPDACNALL NWAGYQQQKA QDMSALREEN LNRLADSLEE SLDLDSLFSG
IEGWR
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