Gene Ssed_2155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2155 
Symbol 
ID5612019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp2607668 
End bp2608444 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content54% 
IMG OID640933059 
Productcobalamin 5'-phosphate synthase 
Protein accessionYP_001473892 
Protein GI157375292 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0368] Cobalamin-5-phosphate synthase 
TIGRFAM ID[TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.430635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGAC ATCTGGGCGC CATTCTCGCT GCCGCCAGCT TTCTCACCCG CTTATCTATG 
CCTCAATGGG TAGGGAAAGA CAGCGAAGCT ATCGCCCAGG CCAGTCGCTG GTTCGCCCTG
ATAGGCCTGT TTATCGGTGT TATCGCAGCT TGCTTGCTCT ATACCTTCAC GGCATTGATG
GGACAAGAGC TGGCGGTGGT ATTGACTCTG GTGGGGATAA TACTGCTGAC CGGTGCATTT
CATGAAGATG GGCTGGCTGA TCTCTGTGAT GGGTTCGGCG GTGGCTGGGA GCGCAGCCGT
AAACTTGCCA TCATGAAAGA CAGCCAGATA GGTGCCTATG GGGTATTAGC GCTCGTCGCC
TCTTTTGCCA TCAAGGTTAT GGCCCTGTCA CAGCTCTCAC TGTCAGCGGC CTGCAGCGCC
CTGATTATCT GTCATGCCGG CAGCCGAGCA GTTGCCGGGC TGGTGGCCGT TTATCTTCCC
TATGCCAGGG ACTGTGACAG TGACAACAAG ACACCACAAA AAGACGCCGC ACTGCCACTG
AGAAACCGAT TCATTCTCTG CATCTGCGGC GCGCTGCCAT TGGCTTTCTT GCCCCTATCT
GCCGCGCTTG CATTACTCAC TGTCTGGCTG CTGACATTTA TCGCCATGAT TAAGTTGATG
CAGCGCCATA TCCAGGGCTA TACCGGCGAC ACCTTAGGCG CCACACAGCA GATAGTCGAG
ATCGCAGGTC TGATATTTTT TGTTATCTAT CACTTTCAAA TAACGGTATC CCCATGA
 
Protein sequence
MKRHLGAILA AASFLTRLSM PQWVGKDSEA IAQASRWFAL IGLFIGVIAA CLLYTFTALM 
GQELAVVLTL VGIILLTGAF HEDGLADLCD GFGGGWERSR KLAIMKDSQI GAYGVLALVA
SFAIKVMALS QLSLSAACSA LIICHAGSRA VAGLVAVYLP YARDCDSDNK TPQKDAALPL
RNRFILCICG ALPLAFLPLS AALALLTVWL LTFIAMIKLM QRHIQGYTGD TLGATQQIVE
IAGLIFFVIY HFQITVSP