Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2155 |
Symbol | |
ID | 5612019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 2607668 |
End bp | 2608444 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640933059 |
Product | cobalamin 5'-phosphate synthase |
Protein accession | YP_001473892 |
Protein GI | 157375292 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0368] Cobalamin-5-phosphate synthase |
TIGRFAM ID | [TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.430635 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGAC ATCTGGGCGC CATTCTCGCT GCCGCCAGCT TTCTCACCCG CTTATCTATG CCTCAATGGG TAGGGAAAGA CAGCGAAGCT ATCGCCCAGG CCAGTCGCTG GTTCGCCCTG ATAGGCCTGT TTATCGGTGT TATCGCAGCT TGCTTGCTCT ATACCTTCAC GGCATTGATG GGACAAGAGC TGGCGGTGGT ATTGACTCTG GTGGGGATAA TACTGCTGAC CGGTGCATTT CATGAAGATG GGCTGGCTGA TCTCTGTGAT GGGTTCGGCG GTGGCTGGGA GCGCAGCCGT AAACTTGCCA TCATGAAAGA CAGCCAGATA GGTGCCTATG GGGTATTAGC GCTCGTCGCC TCTTTTGCCA TCAAGGTTAT GGCCCTGTCA CAGCTCTCAC TGTCAGCGGC CTGCAGCGCC CTGATTATCT GTCATGCCGG CAGCCGAGCA GTTGCCGGGC TGGTGGCCGT TTATCTTCCC TATGCCAGGG ACTGTGACAG TGACAACAAG ACACCACAAA AAGACGCCGC ACTGCCACTG AGAAACCGAT TCATTCTCTG CATCTGCGGC GCGCTGCCAT TGGCTTTCTT GCCCCTATCT GCCGCGCTTG CATTACTCAC TGTCTGGCTG CTGACATTTA TCGCCATGAT TAAGTTGATG CAGCGCCATA TCCAGGGCTA TACCGGCGAC ACCTTAGGCG CCACACAGCA GATAGTCGAG ATCGCAGGTC TGATATTTTT TGTTATCTAT CACTTTCAAA TAACGGTATC CCCATGA
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Protein sequence | MKRHLGAILA AASFLTRLSM PQWVGKDSEA IAQASRWFAL IGLFIGVIAA CLLYTFTALM GQELAVVLTL VGIILLTGAF HEDGLADLCD GFGGGWERSR KLAIMKDSQI GAYGVLALVA SFAIKVMALS QLSLSAACSA LIICHAGSRA VAGLVAVYLP YARDCDSDNK TPQKDAALPL RNRFILCICG ALPLAFLPLS AALALLTVWL LTFIAMIKLM QRHIQGYTGD TLGATQQIVE IAGLIFFVIY HFQITVSP
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