| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2123 |
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| Symbol | rplT |
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| ID | 5610711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2570450 |
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| End bp | 2570809 |
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| Gene Length | 360 bp |
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| Protein Length | 119 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640933026 |
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| Product | 50S ribosomal protein L20 |
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| Protein accession | YP_001473860 |
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| Protein GI | 157375260 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0292] Ribosomal protein L20 |
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| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000359041 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.016896 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTAGAG TTAAGCGTGG TGTAACCGCT CGTGCTCGTC ACAAAAAAGT ACTTAAATTA
GCCAAAGGTT ATTACGGAGC TCGCTCACGT ACTTACCGTG TTGCAAAGCA AGCCGTAACT
AAAGCTGGTC AATATGCTTA CCGTGACCGT CGTCAGAAGA AACGTCAATT CCGTCAACTT
TGGATTGCAC GTATCAATGC GGCATCTCGT CAAAATGGTC TGTCTTACAG CCGTTTCATT
AATGGTTTGA AAAAAGCCTC TATTGAAATC GATCGTAAGA TCCTGGCTGA CATCGCTGTT
TTTGATAAAG TTGTATTTAC AACTTTAGTT GAGAAAGCAA AAGAAGCATT AGCTAAGTAA
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| Protein sequence | MPRVKRGVTA RARHKKVLKL AKGYYGARSR TYRVAKQAVT KAGQYAYRDR RQKKRQFRQL
WIARINAASR QNGLSYSRFI NGLKKASIEI DRKILADIAV FDKVVFTTLV EKAKEALAK
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