Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2122 |
Symbol | rpmI |
ID | 5610710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 2570237 |
End bp | 2570431 |
Gene Length | 195 bp |
Protein Length | 64 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640933025 |
Product | 50S ribosomal protein L35 |
Protein accession | YP_001473859 |
Protein GI | 157375259 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0291] Ribosomal protein L35 |
TIGRFAM ID | [TIGR00001] ribosomal protein L35 |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000215801 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0294636 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTAAAA TGAAAACAGA CAAGGGTGTA GCGAAGCGTT TTAAGAAAAC CGCCAATGGT TTCAAACGTA AGCAAGCCCA TTTACGTCAC ATTTTGACCA AGAAGAGCAC TAAGCGTAAA CGTCACTTAC GTGCAAAATG TCAAGTAGCT AAGTCTGATG TGCCTGCAAT TGCACGTCAA CTACCATACG CTTAA
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Protein sequence | MPKMKTDKGV AKRFKKTANG FKRKQAHLRH ILTKKSTKRK RHLRAKCQVA KSDVPAIARQ LPYA
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