Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2084 |
Symbol | |
ID | 5610450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 2525139 |
End bp | 2526665 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640932981 |
Product | cobalamin biosynthesis protein CbiG-like protein |
Protein accession | YP_001473821 |
Protein GI | 157375221 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2073] Cobalamin biosynthesis protein CbiG |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGTTG CGGTACATGC CATTACTAAA AATGGCGTAG CGCTTGCCCG TCAGCTGGCT GAAGTGATGC CGGAGGTAGA GCTCTTTATC GGCGACCAAT TTGCGATAGA GGACTCTGAG ACCGGGTTCA GCCTGCCGTT GTCAGCTCAC TTTGACCGAC AATTTCACCG CTATAGCCAT CATATTTGCC TGTTTAGTGT CGGTATCGCC GCCAGGAGCA TTGCTCCTCG TCTGGTCGAC AAACGCACCG ATCCGGCCGT CGTCTGCGTC GATGAGCGGG GGCTTCACGC GGTTGCATTT TGTGGAGGCC ACCGCGGCGG TGCTAACGTG CTAAGCGAGC GCGTGGCATA TCTCTTAGGT GGTGAGTCGG TTGTCACAAC TGCATCAGAT TGTGCGCAGA CCCTATCGGC AGACATGATG GGAGCGCATC TTGGTTGGAC CCTGGACCCG AGTTACGAGA AATCGATTAC TTCAGTCAGT GCGGCCATCG TCAACGCTAA ACCCGTCCTT ATCTGTCAGC TGAGCGGTGA ACGCAGCTGG TGGAGGCAGG CGCGGCCTTT ACCCGAGCAT CTGGAACTGA CCGAAGATCC GCAGCGCCTG CAACAAGAAG ATGTGAAGGC TGGGATCCTT ATCTCTGACA AGACTGATCT TGAGCCAAAG TTAGCCGATA GTGCCGAGCT GGCGCTGGTG GTATGGCGTC CCAGGTCGCT GTTTATCGGT ATTGGCTGTG ATCGCAACAC CCCACAAAGC GTGATTGAAC GAGGCCTGGC CAAATTTATG GCTGACAACT CGCTTGCGAT CGATGCTATC GCCGAACTGG CCTCTATCGA TCTGAAAGCT GATGAAGCCG GGATAATTGC AGCGGCGAAT CGATTAAATC GTCCCTTCAA TACCTTTAAT CCACAGACAC TTGAGAAGGT GGTGGGGGTT GAGACCCCGT CTGAAACTGT TAAGCGATGT ATCGGTGTAT CTTCGGTTGC TGAGGCGGCG TGCCTGCATG CATCCGGGCG AAGCGAGCTC TTGATCCCTA AGAGTAAGTT TAAATTCGAT GGCTTCAATA TGACCTTAGC CGCCTGCCGC CGTGACTTCC CGCTGTCGCA ATCTCATCAA GCTGACAAGC TCCATTCCAG CCACAAACCC ATGAAGGCCT GTCCTAATCG CCCCATAAAA CACTATCTGT ATCATCTGAT TGTGTGTGAA GGGGGGCGCT GCGATGTGCC AGGCCAGACG GGGTTAGCTC ATCACCTTCG TACCTTATTA AAGCAGTTTG GATTCGCGAG GGGAGCCGAA CGAATAAAGG TGAGCCGTAG TCACTGTTTG GGTTGTTGTC GCAAGCTGGT TCCTATGGTG ATTTATCAAG GCAAGAGTCA GACAGAGCTG AGTGTAAATC ATGCCTTATG GCTGCAAAAA GTCGACAAGC TAACGGATGA ACAGTGGAAA GAGGTGTTTC AGGCATTAGT CACAAACATG CCTCTAAAAA CATTGTTGCC GAGCCAATAC CTGAGTGAGC AAGAGGTGGC AGCATGA
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Protein sequence | MSVAVHAITK NGVALARQLA EVMPEVELFI GDQFAIEDSE TGFSLPLSAH FDRQFHRYSH HICLFSVGIA ARSIAPRLVD KRTDPAVVCV DERGLHAVAF CGGHRGGANV LSERVAYLLG GESVVTTASD CAQTLSADMM GAHLGWTLDP SYEKSITSVS AAIVNAKPVL ICQLSGERSW WRQARPLPEH LELTEDPQRL QQEDVKAGIL ISDKTDLEPK LADSAELALV VWRPRSLFIG IGCDRNTPQS VIERGLAKFM ADNSLAIDAI AELASIDLKA DEAGIIAAAN RLNRPFNTFN PQTLEKVVGV ETPSETVKRC IGVSSVAEAA CLHASGRSEL LIPKSKFKFD GFNMTLAACR RDFPLSQSHQ ADKLHSSHKP MKACPNRPIK HYLYHLIVCE GGRCDVPGQT GLAHHLRTLL KQFGFARGAE RIKVSRSHCL GCCRKLVPMV IYQGKSQTEL SVNHALWLQK VDKLTDEQWK EVFQALVTNM PLKTLLPSQY LSEQEVAA
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