Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2081 |
Symbol | |
ID | 5611287 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 2522475 |
End bp | 2523131 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640932978 |
Product | precorrin-8X methylmutase |
Protein accession | YP_001473818 |
Protein GI | 157375218 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2082] Precorrin isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCCTA TGAAGCAGAT AACCACGAAG GGCAGAGATA TCGAAGCCAG TTCATTCTCG ATCATCGATG CCGAGATCGC CGACCACTAC AGCGGTCATC AATTTACCTC TCAGCAATGG TCTGTGGTGC GGCGCGCCAT TCATACCAGT GGAGACTTCG AGTTCGCCAA GCTGTTTCAA TTCAGTGCTG ACGCTATCGA TTCTGCATTG CAGGCGATTA AAAATGGCTG CCCTATCGTG GCCGATGTCT CGATGATCAC CGCCGGCTTG AGCGGTCGAA GAATGGATCA ATTTGGTAAC CAGGCCCACT GCTTTATCAG CGATGAAGAT GTGGTTACCC GCGCGATAGC ATCCGGTGGC ACCCGAGCCG TGGAGGCCAT GCGTAAGGCC AGAGATCTGG GCTTGCTCGA TGGTGGGATC GTTGGCGTCG GTAATGCGCC CACTGCGCTA TTTGAACTGC TCAGAATGGT CGAGGCCGGA GAGGTCAAAC CCGCACTGAT TATCGGTATA CCGGTAGGGT TCGTGAAAGC CATCGAGTCG AAAGAGGCCC TGGTTGGACA AGACAAGGTG CCATATATTG CGTCAGTGGG ACGTAAGGGG GGCAGCCCGT TAATCGTATC CAGCTTGCAT GCCCTCATGG TTGAGGCGGC GAGATGA
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Protein sequence | MDPMKQITTK GRDIEASSFS IIDAEIADHY SGHQFTSQQW SVVRRAIHTS GDFEFAKLFQ FSADAIDSAL QAIKNGCPIV ADVSMITAGL SGRRMDQFGN QAHCFISDED VVTRAIASGG TRAVEAMRKA RDLGLLDGGI VGVGNAPTAL FELLRMVEAG EVKPALIIGI PVGFVKAIES KEALVGQDKV PYIASVGRKG GSPLIVSSLH ALMVEAAR
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