Gene Ssed_2081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2081 
Symbol 
ID5611287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp2522475 
End bp2523131 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content55% 
IMG OID640932978 
Productprecorrin-8X methylmutase 
Protein accessionYP_001473818 
Protein GI157375218 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2082] Precorrin isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCCTA TGAAGCAGAT AACCACGAAG GGCAGAGATA TCGAAGCCAG TTCATTCTCG 
ATCATCGATG CCGAGATCGC CGACCACTAC AGCGGTCATC AATTTACCTC TCAGCAATGG
TCTGTGGTGC GGCGCGCCAT TCATACCAGT GGAGACTTCG AGTTCGCCAA GCTGTTTCAA
TTCAGTGCTG ACGCTATCGA TTCTGCATTG CAGGCGATTA AAAATGGCTG CCCTATCGTG
GCCGATGTCT CGATGATCAC CGCCGGCTTG AGCGGTCGAA GAATGGATCA ATTTGGTAAC
CAGGCCCACT GCTTTATCAG CGATGAAGAT GTGGTTACCC GCGCGATAGC ATCCGGTGGC
ACCCGAGCCG TGGAGGCCAT GCGTAAGGCC AGAGATCTGG GCTTGCTCGA TGGTGGGATC
GTTGGCGTCG GTAATGCGCC CACTGCGCTA TTTGAACTGC TCAGAATGGT CGAGGCCGGA
GAGGTCAAAC CCGCACTGAT TATCGGTATA CCGGTAGGGT TCGTGAAAGC CATCGAGTCG
AAAGAGGCCC TGGTTGGACA AGACAAGGTG CCATATATTG CGTCAGTGGG ACGTAAGGGG
GGCAGCCCGT TAATCGTATC CAGCTTGCAT GCCCTCATGG TTGAGGCGGC GAGATGA
 
Protein sequence
MDPMKQITTK GRDIEASSFS IIDAEIADHY SGHQFTSQQW SVVRRAIHTS GDFEFAKLFQ 
FSADAIDSAL QAIKNGCPIV ADVSMITAGL SGRRMDQFGN QAHCFISDED VVTRAIASGG
TRAVEAMRKA RDLGLLDGGI VGVGNAPTAL FELLRMVEAG EVKPALIIGI PVGFVKAIES
KEALVGQDKV PYIASVGRKG GSPLIVSSLH ALMVEAAR