Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2049 |
Symbol | |
ID | 5609980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 2482821 |
End bp | 2483489 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640932942 |
Product | radical activating enzyme |
Protein accession | YP_001473786 |
Protein GI | 157375186 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0602] Organic radical activating enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.341171 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.258883 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATATC CTGTAAATGA AGTGTTCGAG ACGATTCAAG GGGAAGGCTT TTTTACCGGC GTTCCAGCTA TCTTTGTTCG ACTTCAAGGG TGTCCGGTTG GCTGCTCTTG GTGTGACACT AAACACACAT GGGATGTGAT AGAAGAAAAT AGAGTCGCGC CTGAATTGGT GATTCAAGTC GATGGCACTA TCGGGCGTTG GGCCGAACTT ACGGCTGAAG AGCTGATCAG CAACTTCAAA GCAAAAGGTT TTACTGCAAA ACATGTCGTT ATCACGGGGG GAGAACCCTG TTTACATGAT CTGATCCCGT TGACTGAATC ACTGAACCTT TCGGGTTACG CGACTCAAAT TGAGACCAGT GGCACATTTG AGGTGATATG TTCAGATAAA ACCTGGGTAA CGGTTTCACC AAAAATTAAT ATGAAGGCGG GTCTCCCCAT TTTAAATCAG GCCTTGATCA GAGCGAATGA GATCAAGCAT CCGGTTGCGA CCCAAGCGCA TATCGATGAT CTGGATTGTT TACTTAAAGG GATCTCCCTC GATGAGAAGA CCATCTGCTT ACAACCTATC AGTCAGAAGA GTAGGGCGAC CGAACTGGCG ATGCGCGTCT GTATTGAGCG TAACTGGCGC CTCTCAATAC AGACACATAA ATATTTAGAA ATTGACTAA
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Protein sequence | MKYPVNEVFE TIQGEGFFTG VPAIFVRLQG CPVGCSWCDT KHTWDVIEEN RVAPELVIQV DGTIGRWAEL TAEELISNFK AKGFTAKHVV ITGGEPCLHD LIPLTESLNL SGYATQIETS GTFEVICSDK TWVTVSPKIN MKAGLPILNQ ALIRANEIKH PVATQAHIDD LDCLLKGISL DEKTICLQPI SQKSRATELA MRVCIERNWR LSIQTHKYLE ID
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