| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2048 |
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| Symbol | |
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| ID | 5609979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2481935 |
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| End bp | 2482633 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640932941 |
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| Product | ExsB protein |
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| Protein accession | YP_001473785 |
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| Protein GI | 157375185 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0603] Predicted PP-loop superfamily ATPase |
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| TIGRFAM ID | [TIGR00364] exsB protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.49129 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.261357 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAAAAG TGTCAAAAGC GGTAGTTGTA TTTAGTGGCG GACAAGATTC GACCACCTGT
CTGATCCAAG CACTCAATCA ATATGATGAA GTACATGGTA TTACGTTCGA CTACGGACAG
CGCCATAGTC AGGAGATTGA GGTAGCCAGA TCTCTGGGTC AACGCCTCGG GTTGGTCAGT
CATAAGATAT TGGATGTCTC TATGCTCAAT GAGTTAGCCA TATCAGCCCT AACTCGAGAT
TCAATTGAAG TATCCAATGA GCTTATGGAA AATGGATTAC CCAATACTTT TGTACCCGGC
AGAAATATTC TGTTTCTCAC TCTGGCAGGG ATCTACGCGT ACCAATTAGG CGCCGACTCC
GTCATTACCG GCGTCTGTGA AACCGATTTT TCAGGCTACC CGGATTGCAG AAATGACTTC
GTTAAGACGA TGGAGTCGGC ATTGAATCAA GGAATGGATC GACAATGTAA AATCGTCACC
CCCTTAATGT GGTTAAATAA AGCCGAGACC TGGGCTTTAG CCGACCAATA TAAGAGCCTC
GAGTTAGTCA GAGATGAAAC ATTAACCTGT TATAACGGCA TCATTGGCAA TGGGTGCGGG
ACCTGCCCTG CTTGTCTTCT CAGACAAAGT GGCTTAGAGG ACTACAGTAA TAACAGGGAG
CAAGTTCAAT CGGACTTAGC ATCTAAATGT CACAAATAA
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| Protein sequence | MSKVSKAVVV FSGGQDSTTC LIQALNQYDE VHGITFDYGQ RHSQEIEVAR SLGQRLGLVS
HKILDVSMLN ELAISALTRD SIEVSNELME NGLPNTFVPG RNILFLTLAG IYAYQLGADS
VITGVCETDF SGYPDCRNDF VKTMESALNQ GMDRQCKIVT PLMWLNKAET WALADQYKSL
ELVRDETLTC YNGIIGNGCG TCPACLLRQS GLEDYSNNRE QVQSDLASKC HK
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