Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2040 |
Symbol | |
ID | 5614005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 2469737 |
End bp | 2470363 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640932926 |
Product | electron transport complex protein RnfG |
Protein accession | YP_001473777 |
Protein GI | 157375177 |
COG category | [C] Energy production and conversion |
COG ID | [COG4659] Predicted NADH:ubiquinone oxidoreductase, subunit RnfG |
TIGRFAM ID | [TIGR01947] electron transport complex, RnfABCDGE type, G subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.8254 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAAAAA ACGGTTTGCT ACTGGGTGTA TTCGCACTTT TTTGTACTGC ACTCGTGGCT GTCGTCAACC AGCAAACCTT CGACAAGATA AAGCAGCAGC AGCGACTCGA GTTAAAACGG GTGTTACATC AAATCGTCCC CGATGAACTT CATGATAATG AACTCACTGA ATACTGTATT CTTATTCATG ATGAAGATGC ATTAGGTATC GATGAGCCCT TGTCTTCATA CATAGCGACT AAGCAGAGTC TTCCCGTTGC TATCGCAATA GAAGCTGTTG CGCCTGACGG ATATAACGGT AATATCAGAC TCATCATAGG CATCAATACC GCGGGTGAAG TACTGGGTGT AAGAACCCTG AATCACTCAG AGACGCCAGG CCTTGGTGAC AAGATTGATT TAAGAAAATC AGATTGGGTA TTGGGCTTTA ATAATAGAAG CATACAAGAT GAAAAGGATA GACTCTGGCT GGTCAAAAAA GATGGCGGAG ATTTCGATCA ATTTACCGGT GCAACCATTA CTCCCAGAGC CTACGTTAAA GCGGTAAAGA ATGCCCTGCT GTATTTCAAT TCAAATAAAG ATACCTTGCT AACAAGGCCT GCAAATTGCG AGGTTAACTA CCAATGA
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Protein sequence | MIKNGLLLGV FALFCTALVA VVNQQTFDKI KQQQRLELKR VLHQIVPDEL HDNELTEYCI LIHDEDALGI DEPLSSYIAT KQSLPVAIAI EAVAPDGYNG NIRLIIGINT AGEVLGVRTL NHSETPGLGD KIDLRKSDWV LGFNNRSIQD EKDRLWLVKK DGGDFDQFTG ATITPRAYVK AVKNALLYFN SNKDTLLTRP ANCEVNYQ
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