| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1938 |
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| Symbol | |
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| ID | 5610331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2336643 |
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| End bp | 2337917 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640932824 |
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| Product | nitrate/nitrite transporter |
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| Protein accession | YP_001473677 |
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| Protein GI | 157375077 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2223] Nitrate/nitrite transporter |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATTC AACTGCGTCG TTCTTACCAG GCTTTAACAC TTGCCACCTT GGCTTTTGCT
GCATGTTTTT CTGTTTGGAC ACTCTATTCA ATCATCGGCA TCGAGGTCAA AGAGCGTTTG
GGTTTGAGCG CAACCGAGTT CGGTTTTCTG CTTGCTGCTC CCATTTTTAC CGGCGCAATC
TTTCGTGTTC CTATAGGCTT TATGGCTGAA AAAGTATCAT GCCGTAATCT CTTTTTCTGG
CAGATGTTGC TCGCCGTCCC TCCGTTATTC TACCTGCCTC ATATAGAAAC CTATTCGGGT
TATATCTTGA TTGGTTTCGT GCTGGGGCTG ACTGGAGTCT CGTTTACGAT AGGCATTCGT
TATGTCACCG ACTGGTTTGA GACTAAACGT CAGGGTTTTG CACTGGGGGT GTTTGGTGCG
GGTAATGCGG GCGCCGCAAT CACCCTGGTT TTGGTGCCTT TTATTGTCGA TATCTTTGGT
TGGCAACAGA TAGGTTACGC CTACGGGATT GGCATGATCT TTATGGCGGT GCTGTTTCGT
TTGATGGCGC CTGAAGTGAA TGAGTATTAT CAGAAACAGA GAGATAGTCA TGATATGGCG
TTTCATATGG CGCCCCTTAA AGATCTGCAG GTGTGGCGTT TCGGGCTCTA CTATTACTTC
GTATTCGGCA GTTTCTTAGC GTTAATTCTC TGGCTGCCCC ATTATTATGT CTCCGCTTAC
GAGCTGTCTC TGACTCAAGC TATGGCGTTG ACCTTACTCT TTGTCACCAG CTCGAGCATG
GTCAGAGCCG TGGGCGGCTG GTTCGCCGAT ACTTATGGGG CGAGGGCGGT GAATTGGACA
GCCTTCTGGA TCTGTATGGT GTGTCTGTTT TTCTTGAGTT ACCCGCCGAC GACCATGATC
ATCCATGGTG TATCTAAAGA TGTTGAAGTC TCTTTCGAAG TGAATGTCTG GCTGTTTACC
CTGTTGATTT TCATCATTGG TATCGCCCAG GGCTTTGGTC GAGCCAGCGT GTATAAGACT
ATCTATGATT ACTATCCACA TCATATGGGC AGTGTTGGGG GCATTGTCGC CGCCATCGGT
GCATTAGGTG GATGTACGCT TCCTATCATG TTCGGTTTTG CCGTCGATCT GATCGGCGTC
TATAGTGCCT GCTTTATGTT GCTCTATGGT GTGTTGGCGA CCTGTATGGT GGTGATGTAC
TTGGCGCTAA GAGCCGAGCG ACATCAGAAG CTGGTGAGAG AGGCGATAGC CAATAACTTT
TTAGAACAAG ATTAA
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| Protein sequence | MDIQLRRSYQ ALTLATLAFA ACFSVWTLYS IIGIEVKERL GLSATEFGFL LAAPIFTGAI
FRVPIGFMAE KVSCRNLFFW QMLLAVPPLF YLPHIETYSG YILIGFVLGL TGVSFTIGIR
YVTDWFETKR QGFALGVFGA GNAGAAITLV LVPFIVDIFG WQQIGYAYGI GMIFMAVLFR
LMAPEVNEYY QKQRDSHDMA FHMAPLKDLQ VWRFGLYYYF VFGSFLALIL WLPHYYVSAY
ELSLTQAMAL TLLFVTSSSM VRAVGGWFAD TYGARAVNWT AFWICMVCLF FLSYPPTTMI
IHGVSKDVEV SFEVNVWLFT LLIFIIGIAQ GFGRASVYKT IYDYYPHHMG SVGGIVAAIG
ALGGCTLPIM FGFAVDLIGV YSACFMLLYG VLATCMVVMY LALRAERHQK LVREAIANNF
LEQD
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