| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1905 |
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| Symbol | |
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| ID | 5610801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2290317 |
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| End bp | 2290874 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640932791 |
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| Product | hydrogenase expression/formation protein |
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| Protein accession | YP_001473644 |
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| Protein GI | 157375044 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0680] Ni,Fe-hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00072] hydrogenase maturation protease
[TIGR00140] hydrogenase expression/formation protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0136333 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGGTAT TGCTACTAGG TATTGGCAAT GTCCTGTACG CAGATGAAGG TATCGGTGTA
CATTTCGTCA ATTATATCGC TGAAAATTAT AAATTCAGCC ATGAGAGTGA CCAGCTGGAT
ATTACAGATG GTGGCACCCT CGCCCAAGGT TTAATCCCGA TTATCTGTCA ATATGACTAC
TTAATCGTGG TCGATACCGT AAATGCCCAT GATGTCGAAC CCGGACAGGT CTATTTCTTC
GATTTCGATA AGGCCCCGGC AGAGATCGAC TGGCAAGGCA GTGCTCACGA AGTTGAAATG
CTGCAAACAT TGAACATGAT GGATATGGTA GGCGATCGTC CTAAAACCTA TATCTTAGGT
GTCACTCCAA CTGTACTGGA GCCGATGACA TTAGGTTTAA CCCCTATGGT AGAAGCTGCC
GTTCCTTTGA TGGAAAAAAC ACTTTTAGCA CATCTTAATC AGCTTAATTT CAGCTGTGAA
CGAATCAACG AAACAGATAT CAATACCTTA ATCCCCGAGT CATACAAACG CGGTGTTAAT
TATAATGAAG AATATTAG
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| Protein sequence | MKVLLLGIGN VLYADEGIGV HFVNYIAENY KFSHESDQLD ITDGGTLAQG LIPIICQYDY
LIVVDTVNAH DVEPGQVYFF DFDKAPAEID WQGSAHEVEM LQTLNMMDMV GDRPKTYILG
VTPTVLEPMT LGLTPMVEAA VPLMEKTLLA HLNQLNFSCE RINETDINTL IPESYKRGVN
YNEEY
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