| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1889 |
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| Symbol | aat |
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| ID | 5610989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2275580 |
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| End bp | 2276290 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640932775 |
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| Product | leucyl/phenylalanyl-tRNA--protein transferase |
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| Protein accession | YP_001473628 |
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| Protein GI | 157375028 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2360] Leu/Phe-tRNA-protein transferase |
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| TIGRFAM ID | [TIGR00667] leucyl/phenylalanyl-tRNA--protein transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0580804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000136244 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAACTCAC TGTCCTATTT AAATCATGAG CTCGAAAGGT TTCCTTCACC GGAATATGCA
CTAACCGATC CTAATGGTCT GCTCGCTATC GGTGGAGACT TACATCCGAC TCGACTGTTA
AATGCCTATT ACGAAGGTAT TTTCCCCTGG TTTAATGCCG ACGACCCTAT TCTTTGGTGG
TCTCCCGATC CACGGGCAGT GTTCGTTCCC GGCACGATGA AGGCCAGCCG AAGCTTGATC
AAGTCGCTTA AGAAACAAAC CTGGACCTTT ACCATAAACC GCGCCTTTAA AGAGGTGATG
ATCGGTTGTG CTGCACCCAG GGCTGCGCAG GATGGCACAT GGATCACCCA AGACATTCAA
CACGCCTACC TTGAGCTACA CAAACAGGGG CTGGCACACT CTGTTGAGGT CTGGGATGAA
GAGACACTGA TTGGGGGATT ATACGGACTG GCTATAGGGC AAGTTTTCTG TGGCGAGTCG
ATGTTTCATA CACAGACAAA TGCTTCTAAA GCTGCCATGC TGGTATTACA TCAGTATCTT
TTAAAACAAG GGTTCAAACT AATAGACGCT CAGGTGGTGA ATCCGCATCT TGAATCACTA
GGCGCTACCG CATTAAAGAG AAAAGATTTT ATTAATCTAC TTAAACGTTT TCGTGACGGT
AAGGTCGCCT CGAACTCCTG GGTAGTAAAA GAGGTATTTC TTGAGCTTTA A
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| Protein sequence | MNSLSYLNHE LERFPSPEYA LTDPNGLLAI GGDLHPTRLL NAYYEGIFPW FNADDPILWW
SPDPRAVFVP GTMKASRSLI KSLKKQTWTF TINRAFKEVM IGCAAPRAAQ DGTWITQDIQ
HAYLELHKQG LAHSVEVWDE ETLIGGLYGL AIGQVFCGES MFHTQTNASK AAMLVLHQYL
LKQGFKLIDA QVVNPHLESL GATALKRKDF INLLKRFRDG KVASNSWVVK EVFLEL
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