| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1873 |
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| Symbol | |
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| ID | 5609727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2260568 |
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| End bp | 2261008 |
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| Gene Length | 441 bp |
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| Protein Length | 146 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640932759 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473612 |
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| Protein GI | 157375012 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3816] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000126368 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGAGTGAAA GTAGCAAGAC CGCTGATTGT GAGTTAGCTA AGCTGACTAA AGGGGCGCCG
CTTTGCTCTG AGGACCCCCT GTTTAATATC ACTACTCAGG GTGACTGGTA TTATCGAGGA
GAGCGATTAC CGAACAAGTT TGCCCGGCTC TTCTCCTCGA TTTTACACTG TATCGACGGC
CAATATTACC TGATCACTCC AGCTGAAAAG TTACGGGTAA TGGTTGCTGA TGCGGCGTTA
ATCATCGTGG GTTACGAACA GAAAGAGCAT GCATTTTTGC TAGACTCTGC TCTTGAGACG
AAGCATAAGG TGGAAAATGT GAAGGCATTT GAACTTAATG ATGAAGGCAT TTTCCTTGAG
TTAGAGAGAG GCCTCAAAGC TAAATTGGGC CGTGCTTGCT ATTACCGCTT TATCAATCAG
TTCATAATTT CTGAAAATTA A
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| Protein sequence | MSESSKTADC ELAKLTKGAP LCSEDPLFNI TTQGDWYYRG ERLPNKFARL FSSILHCIDG
QYYLITPAEK LRVMVADAAL IIVGYEQKEH AFLLDSALET KHKVENVKAF ELNDEGIFLE
LERGLKAKLG RACYYRFINQ FIISEN
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