| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1868 |
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| Symbol | |
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| ID | 5611639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2251458 |
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| End bp | 2251883 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640932754 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001473607 |
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| Protein GI | 157375007 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1607] Acyl-CoA hydrolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000872149 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000925313 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCCACTCA CTCAAACATC AGATCCTCGC TCCGATGCGA TCAACAAACG TATAAAACAC
TCAGAAGCCA GAGTCATCAA AGCTATCTTT CCCTCTATCA CCAACCACCA CAACACCCTA
TTCGGTGGTG AAGCGTTAGC CTGGATGGAC GAAACGGCTT TTATCGCAGC CACTCGCTTT
TGTCGTAAAC CATTGGTTAC CGTCAGCTCG GACAGAATTG ACTTTAAGAA GGCCATTCCT
GCCGGCAGTC TCGCAGAGAT CATCGCCAAT GTTATCCATG TCGGCAACAC ATCCCTGAAG
GTCGAGGTCA ATATCTTTGT CGAAGATATG TACAAAGATC ATCGAGAGCA TGCCATACGA
GGTGTTTTCA CCTTTGTCGC CGTCGACGAT AACAGACAGC CAACTAAGGT CTGGACGCAA
GAGTAA
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| Protein sequence | MPLTQTSDPR SDAINKRIKH SEARVIKAIF PSITNHHNTL FGGEALAWMD ETAFIAATRF
CRKPLVTVSS DRIDFKKAIP AGSLAEIIAN VIHVGNTSLK VEVNIFVEDM YKDHREHAIR
GVFTFVAVDD NRQPTKVWTQ E
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