| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1818 |
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| Symbol | |
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| ID | 5612481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2193754 |
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| End bp | 2194947 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640932694 |
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| Product | lysine 2,3-aminomutase |
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| Protein accession | YP_001473557 |
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| Protein GI | 157374957 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1509] Lysine 2,3-aminomutase |
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| TIGRFAM ID | [TIGR00238] KamA family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCAGG CATCCATACA AGTTAAGCAG TACACCCCGC AGATCCCCCT TAAGCTGGTC
AAAAATAATA AAGAAGATAA GTTTGCTGAC TACCAGTCAC TGATGGACTT TGATGTTGCC
AGCCGTCCCT GGCGGGAAAC ATTGGCTCAC TCCTTTAAAA CGGACAAGGA GCTCTCCAAA
GTATTCGGTA ATATCAATCC GGTCGAAGAG GACGTTTATA AGGTCATCGC CACCCGTATT
ACGCCCTATA TTGCTCAGTT GATGGACAAG GACGATCAGG CATGCCCAAT CCGCATTCAA
TACGTTCCTG AGCAAAATGA AATGGATGTA GCACCACAAG AGATGGGGGA TCAGCTGGCT
GAAGATGACA TGATGCCTGA TGGAACCTCT ATCGTTCACC GCTATCCTAA CCGCGTGCTC
TTTCTGGTAC ACAATATTTG TGGCGCCTAT TGTCGCCACT GTACCCGAAA GCGCATGGTG
TCAGATCCCC TGAATGTTAT CTCTATGGAG CGGATCCGCA AATCTGTGGA ATACCTACGT
GAACACCCGG AAGTACAGGA TGTGCTGCTC TCTGGCGGTG ATCCATTGTT GCTGACTGAT
GACAAGCTAG ACCAGGTGTT GTCCATGATC CGTGAAGCAA GGCCTGATCT GAAAATATTG
CGTATCGGCA GCCGCTTACC AACTCAGTTG CCTACACGTA TTACGCCAGA GCTGTGTCAG
ATACTGGTTA AAAACCGCGT CACCCTGCTC AATACCCAAG TTAATCATCC CAAAGAGATC
ACTCCATTGT TTGTGAAGCA TATGGCAATG CTGCGCACCA GCGGCATTAT GCTTGGTAAC
CAAAGCGTGT TGATCAAGGG AGTTAACGAC AGCGTTGAAG TGATGCGCGA TCTGGTCATG
GATCTGGTCT CCAATGGTAT TCGTCCTTAC TATGTTTACT CCATGGATCC CGCTCCCGGT
AACAGCAAGT TTCAGGTCAG CTACGACCGT ATGCTGGAGA TCTACCATGG CATCCGGGGT
TGGGTATCGG GGCCTGCCAT TCCAACCTTT ATCGTCGATG GCATTGGTGG TCTGGGTAAA
ATGCCGGTAC AGCCGGAATA CGTGCGCAAA CAAGTGATCG ATGGCGAAAC TAAACTCTTA
GCTACCAACT TTGAAGGGCG AAACGCCGAC ATGTCTTTCC TGCTGGGTGA GTAA
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| Protein sequence | MSQASIQVKQ YTPQIPLKLV KNNKEDKFAD YQSLMDFDVA SRPWRETLAH SFKTDKELSK
VFGNINPVEE DVYKVIATRI TPYIAQLMDK DDQACPIRIQ YVPEQNEMDV APQEMGDQLA
EDDMMPDGTS IVHRYPNRVL FLVHNICGAY CRHCTRKRMV SDPLNVISME RIRKSVEYLR
EHPEVQDVLL SGGDPLLLTD DKLDQVLSMI REARPDLKIL RIGSRLPTQL PTRITPELCQ
ILVKNRVTLL NTQVNHPKEI TPLFVKHMAM LRTSGIMLGN QSVLIKGVND SVEVMRDLVM
DLVSNGIRPY YVYSMDPAPG NSKFQVSYDR MLEIYHGIRG WVSGPAIPTF IVDGIGGLGK
MPVQPEYVRK QVIDGETKLL ATNFEGRNAD MSFLLGE
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