| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1783 |
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| Symbol | |
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| ID | 5610663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2144719 |
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| End bp | 2145270 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640932653 |
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| Product | D,D-heptose 1,7-bisphosphate phosphatase |
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| Protein accession | YP_001473522 |
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| Protein GI | 157374922 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0241] Histidinol phosphatase and related phosphatases |
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| TIGRFAM ID | [TIGR00213] D,D-heptose 1,7-bisphosphate phosphatase
[TIGR01656] histidinol-phosphate phosphatase family domain
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000391203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGCCCTG CAGTTTTTTT AGATAGAGAT GGTGTCATCA ATGTCGATCA TGGTTATGTT
CATCTGGTCG ATGACTTTGA ATATGTCGAA GGCGTATTTG ATGCCTGTCG TTCCCTTAAA
GAGATGGGAT ACAAACTAGC TGTAGTGACA AATCAGTCCG GAATCGCTCG TGGTATGTAT
AGTGAAGAGC AATTTCACAG CTTGACCGAG TGGATGGATT GGAACTTCGT AGATAAAGGT
GTGGAGCTCG ATGGCATCTA TTATTGCCCT CACCACGCAG AAAAAGGGTT AGGCGACTAT
AAGCAGGACT GTGATTGTCG CAAGCCAAAA CCTGGGATGA TGTTGACCGC TGCCGAGTTT
CTTAACATTG ATCTTAGCGA GTCTGTAATG GTCGGTGATA AGCGTGATGA CATGTTGGCT
GCCATGGCTG CAGGGATCCC GACGCGTATA TTGGTACGCA CTGGAAAATC GGTAACCGAT
GACGCTATTG CAGCATCCAC TGTCGTACTC GATTCAATTG CCGATGTTCC GGCCTATTTA
AAAAGCCTCT AG
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| Protein sequence | MSPAVFLDRD GVINVDHGYV HLVDDFEYVE GVFDACRSLK EMGYKLAVVT NQSGIARGMY
SEEQFHSLTE WMDWNFVDKG VELDGIYYCP HHAEKGLGDY KQDCDCRKPK PGMMLTAAEF
LNIDLSESVM VGDKRDDMLA AMAAGIPTRI LVRTGKSVTD DAIAASTVVL DSIADVPAYL
KSL
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