| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1782 |
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| Symbol | |
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| ID | 5610662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2143107 |
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| End bp | 2144492 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640932652 |
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| Product | peptidase M24 |
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| Protein accession | YP_001473521 |
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| Protein GI | 157374921 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0006] Xaa-Pro aminopeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000518902 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCAG CGCATTTTAG CCCTACCTTT AAGCAGGTAT TATCGGTGAA CCAGAAAGAG
CCTGTAATTA TGACAAATAT CTATCAGATA AGAAGAGAAG CTCTGTTTAA GCAACTACCG
GAGAATAGCT TCGTTATTCT CTCCGGCTAT CAACAAAAGA TCAGAAGTAA AAATATTAAG
TATCACTTCA GGCAAGATAA TGACTTTCTC TATCTTACCG GCTTCGATGA ACCAGATGCG
GTGGCTATAC TCGCAGCCGA TAAGGGTGCA GCATCGGGTT TCAGCTTTAC CTTACTGTGC
CGCCCTAAAG ATCCTAGCCA AGAGGTCAGC TTCGGTGAGC GTGCCGGTAC TGAAGGTGCT
ATTGCAAACT TCGGCGCCGA TGACGCCTTC GATATCGCCG AGCTTAATGA AGTTGTCTTA
TCAAAAATAG TCGACCATCA ACATATCTAT ATCAGTGATG AACTCAGCCG TTTCTCTACT
CAGATAGTGG GCTGGCTAAA CCATCAAAGA ATGACGACCC CTTTTGATAC GGTCAAACAG
TACCGCAGCC TGACTCCGCT GGCAAAGTAC TTACACCCTA TGCGCGTCAT CAAGAGCGAG
GAGGAAATTA ACCATATAAA AGCCGCCGTA GCTGCATCGG TCGATGGCCA TAAGGCGGTT
ATGCAAGCGT GTAAACCCGG TATCAATGAA GCGCTGTTAT CTGCAACGTT TGATTTTACC
CTCTCTCAAT TCGGCAGTAC CGATGTCGCC TACCCCAATA TTGTCGCTGC GGGTAACAAT
GCCTGCTGTC TTCACTATGA GGAAAACTGC TGTACAGTAG AAGACGGACA GATGTTGTTG
ATCGATGCCG GTGGTGAGTT AAACCATTAC GCCTCGGATA TTACCCGCAG TTACCCGGTG
AACGGGAAAT TCACCGACGC ACAGAAGCAC ATCTATCAAC TGGTTTTAAG CGCACTCGAC
TCCGCCATCG CAAAAGTTCA GCCCGGTACC CCCTGGAATG AACTGTATGA AACCTGCATA
GAGCTGATGG CCAAAGGGCT GTTAGAGCTG GGCTTCTTAA GTGGCAATAT CGAAGAGGTA
ATGGAAAGCC AGAGTTATAA GCGTTTCACG GTACATAAGA CCGGCCATTG GCTCGGCATG
GATGTCCATG ACGTCGGTCC TTATCACGAC AGTGACGGTA ATTGGCGCAG GCTCGAACCC
GGCATGGTGT TTACCATTGA ACCCGGAATT TATATCCCGC TCGATGCCAT CGACGTCCCT
TCGGCATACC GGGGTATGGG TATTCGTATC GAAGATGATA TTTTAGTCAC CGAATCCGGG
CATGAAAATC TATCGGTTAA TGCCCCACGT ACCATCGAAG AGATCCAAGC TATTATGCTG
AATTAG
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| Protein sequence | MKPAHFSPTF KQVLSVNQKE PVIMTNIYQI RREALFKQLP ENSFVILSGY QQKIRSKNIK
YHFRQDNDFL YLTGFDEPDA VAILAADKGA ASGFSFTLLC RPKDPSQEVS FGERAGTEGA
IANFGADDAF DIAELNEVVL SKIVDHQHIY ISDELSRFST QIVGWLNHQR MTTPFDTVKQ
YRSLTPLAKY LHPMRVIKSE EEINHIKAAV AASVDGHKAV MQACKPGINE ALLSATFDFT
LSQFGSTDVA YPNIVAAGNN ACCLHYEENC CTVEDGQMLL IDAGGELNHY ASDITRSYPV
NGKFTDAQKH IYQLVLSALD SAIAKVQPGT PWNELYETCI ELMAKGLLEL GFLSGNIEEV
MESQSYKRFT VHKTGHWLGM DVHDVGPYHD SDGNWRRLEP GMVFTIEPGI YIPLDAIDVP
SAYRGMGIRI EDDILVTESG HENLSVNAPR TIEEIQAIML N
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