| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1757 |
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| Symbol | |
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| ID | 5610648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2110884 |
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| End bp | 2112284 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640932627 |
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| Product | NAD(P)(+) transhydrogenase (AB-specific) |
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| Protein accession | YP_001473496 |
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| Protein GI | 157374896 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1282] NAD/NADP transhydrogenase beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.284684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.879821 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTATAG GATTATTAAG TGCAGCTTAT TTGGTTGCTG CAGTCCTGTT TATCTTCAGT
CTTGCAGGCT TAAGTAAACA GGAAACCGCT CAACGCGGTA ATATCTTGGG TATTATCGGT
ATGGTGATTG CGATTGTCGC AACCCTTGCC AGTACTCAAA TTGGGGATAA TAGCTGGATT
GTTACCGGTG CAATGGCCAT AGGTGCGGCT ATCGGTGTGC GTTTAGCACT GAAAGTTGAG
ATGACCGAAA TGCCTGAGCT GGTGGCTATC TTGCACAGCT TTGTGGGTAT GGCGGCAGTA
CTGGTTGGTT TCTCGAGCAC ACTGGACCAC GGTGCCTTGA TGGATGCGGT GACGGGTCAT
ATCGATCCCG TGGCTAAAAC CATTCATGAT GTTGAAGTGT TTCTCGGTAT CTTTATCGGT
GCGGTGACCT TTACCGGTTC AGTAGTGGCT TTTGCTAAGC TTCGTGGCTT GGTCAGTAGC
GCGCCTAAAT CACTGCCTGG CGCACATTGG TTAAACCTTG GCATGATAGC CGCATCTGTT
ATCTTAGGTG CCTATTACAT GCAAACCGAT GCGATTGGAG CCTTGGTTAT CATGACGCTG
ATTGCCTTCG TATTCGGTTA TAACTTGGTA TCGGCCATCG GTGGCGCAGA TATGCCAGTG
GTTGTCTCTA TGTTGAACTC CTACTCAGGT TGGGCAGCAG CGGCAGCAGG TTTCATGTTA
GGTAACGATC TGTTGATCAT TACCGGTGCG TTAGTCGGTA GCTCGGGTGC AATCCTCTCT
TACATCATGT GTAAAGCGAT GAATCGTTCA TTTATCTCTG TGATCTTAGG TGGCTTCGGT
ACCGAAGGTG GCACTGTGCT AGAACGGGTT GCCGATCAAG GCGAGCACCG CGAAGTGCAG
GCCGATGATG TCGCCGATAT GCTGAAAAAT GCACGCAACG TTATCATAGC CCCTGGTTAT
GGTATGGCGG TTGCGCAGGC TCAGTATCCG GTTGCCGAGA TCACTCAGAA ACTGCGTAAG
CGTGGTGTGA ATGTGCGTTT TGCTATTCAT CCGGTAGCGG GGCGTTTGCC TGGTCACATG
AACGTGTTAT TGGCCGAAGC TAAACTGCCA TACGATATCG TGATGGAGAT GGATGAGATA
AACGATGATT TCGCCGATAC CGATGTGGTA TTGGTTATTG GTGCGAATGA CACGGTTAAC
CCAGCAGCGA AAGAGCCTGG TAGCCCAATC TCGGGTATGC CGGTACTCGA AGTCTGGAAT
GCTGATAACG TGGTTGTCTT CAAGCGTTCT ATGGCGACAG GTTATGCTGG CGTGCAGAAT
CCGCTCTTCT TTAAAGAGAA CACGGAAATG CTGTTCGGTG ATGCTAAAGA AACGGTTAAC
AAAATTTTAG CCAATATCTA G
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| Protein sequence | MSIGLLSAAY LVAAVLFIFS LAGLSKQETA QRGNILGIIG MVIAIVATLA STQIGDNSWI
VTGAMAIGAA IGVRLALKVE MTEMPELVAI LHSFVGMAAV LVGFSSTLDH GALMDAVTGH
IDPVAKTIHD VEVFLGIFIG AVTFTGSVVA FAKLRGLVSS APKSLPGAHW LNLGMIAASV
ILGAYYMQTD AIGALVIMTL IAFVFGYNLV SAIGGADMPV VVSMLNSYSG WAAAAAGFML
GNDLLIITGA LVGSSGAILS YIMCKAMNRS FISVILGGFG TEGGTVLERV ADQGEHREVQ
ADDVADMLKN ARNVIIAPGY GMAVAQAQYP VAEITQKLRK RGVNVRFAIH PVAGRLPGHM
NVLLAEAKLP YDIVMEMDEI NDDFADTDVV LVIGANDTVN PAAKEPGSPI SGMPVLEVWN
ADNVVVFKRS MATGYAGVQN PLFFKENTEM LFGDAKETVN KILANI
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