Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_1734 |
Symbol | |
ID | 5609981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 2082121 |
End bp | 2082894 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640932604 |
Product | putative sulfate transport protein CysZ |
Protein accession | YP_001473473 |
Protein GI | 157374873 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2981] Uncharacterized protein involved in cysteine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.847735 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000000137908 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATCAAA CAGCTAAAAC ATCCCGTAAG AGTGGGATGG ACTACTTTCT CTTCGGATTT AGCCTGATAA AACAGAAAGG GCTGAGAAGT TTTGTGTTTA TTCCACTGAT GGTTAACCTG CTGCTTTTCT CCGGCGTTAT CTATTTCGCC ATTGGCCAGC TGGAAAATGC CTTCGGCTGG ATCTCGGCCC AGCTCCCCGA TTACCTGAGC TGGCTCAACT TCATCCTCTG GCCATTGGCC GTCATCACCT TATTGGTGGT GCTCTCATTT ATCTTCAGCT CAGTGATGAA CTGGATAGCC GCCCCCTTTA ACGGCCTGCT CGCCGAAAAA GTGGAGCAGC ACCTGACAGG CAAAGATCTC AACACAGGCA CCACCGTCGA CTTGGTTAAA GACCTGCCGC GGATATTCGG GCGGGAATGG ATAAAGCTTA AATATTACCT GCCCAGAGCC ATCATCTGTC TGATCCTGTT CTGGGTCCCC CTGCTGGGTC AAACCGCCGC CCCGGTTATC TGGTTCCTAT TCAGCGCCTG GATGATGGCC ATTCAGTACT GTGATTATCC CTTCGATAAC CACAAGGTGG CCTTCACTGA CATGAAGTTT GCTCTCAATC AGACCAAAGG CACCAGCTTC ACCTTCGGCG CATCAGTCAC CCTGTTCTCG ATGATCCCGA TCGTCAACTT TATCGTCATG CCGGTAGCCA TTTGCGGCGC CACGGCGATG TGGGTAGATA AGTATCGTGA AGCCTACAAG CACCCGGAGA TAGCGCCGGA GTAA
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Protein sequence | MNQTAKTSRK SGMDYFLFGF SLIKQKGLRS FVFIPLMVNL LLFSGVIYFA IGQLENAFGW ISAQLPDYLS WLNFILWPLA VITLLVVLSF IFSSVMNWIA APFNGLLAEK VEQHLTGKDL NTGTTVDLVK DLPRIFGREW IKLKYYLPRA IICLILFWVP LLGQTAAPVI WFLFSAWMMA IQYCDYPFDN HKVAFTDMKF ALNQTKGTSF TFGASVTLFS MIPIVNFIVM PVAICGATAM WVDKYREAYK HPEIAPE
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