| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1672 |
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| Symbol | |
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| ID | 5610167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2003566 |
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| End bp | 2005641 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640932542 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473411 |
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| Protein GI | 157374811 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000600124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAACA AGATAAAACA TGCCAAACAT GCTTTAGCGG TAGCAATCGG TCTGCTGAGC
TTTTCGGCTT CAGCAAGCGA AGCGATCACG GCGGAAGAGT TGGCAACACT TCAACAGGTG
ACTCAGGTAC AGGTCAGCCC TGACGGCGAC AGCGTAGCAT TTACCCGTTC GGTACCGAGA
AAACTTTATC AGGACAAAGA TGGCTTGAAT TGGGGCGAGC TATACATTGT CGACGATAAA
GGCGTTGAAC GTCCTTACAT CACGGGCGAA GTGAATATCA AGCAGATCCA GTGGTCAAAA
GACGGCACTT TGATCTATTT TCTTGCCAAG ATGGGCGATG ATGAATTCGT CACCCTATAC
CAGATCCCAT TCGATGGTGG TCAGGCCCTG AAAACCATGG CTCTCGATGG TACCGATATC
GGACACTTCT CATTAAGTGA AGATAATAAG CAGATCGCGT TATTGGCCAT GCCAGCCAAA
GAGAAATCAG AGAAGAAACT TAAGGAGCTG GGTTTTAAGG CTGAGATCTA CGAAGAGAAC
TTAAAGAACA AGCAGCTATT TGTTGTCGAC CTCGCCGTTA CCGACAAACC ACTAAAGCCA
ATAGCGTGGG AGATAGAGGA TTATGTCTCG GATATGCATT GGTCTCCTGA GGGAGAGACG
CTGTTAATCA AGACTCAGCC AACTGCTCTG ATCGATGATA AATACATGAA ATCGAAGTGG
CAGATAGTCA ATATCGCCAC TCAACAAACC GTGACGACCT TTATTACCGA AGGGAAATTA
GGTGCAGCCG AGTTTTCCCA TGACGGTAAA TATATCGCCA TCCATGGCGC CGAAGATAAG
CATGACCCGG CAACCGGACG TCTGTTCCTG GGGAATGTTA AAAGCGGTGA AGTGACCGAT
TGGTTGCCTG ACTTCAAGGG CCATGTAGCA GATTTTGAGT GGGCTAACGA TGAGAACACT
CTGTATTTAA TCGCAAATGT GGATACTCAG TCGGTAGTCG CCACCATCAA GCCCGGTAAG
ACTAAATACA AGGAGGTGGT TAAGGGCGGC AAGTTTATCG CCGGCAAGCT GAGCATCTCA
GATTCGGATG CAACGGTAAC TTTAAAAGGC AATACAGCCG AGCATCCCAA CGAAGTGTTT
ATGCTCCGTG GCAGCAAACA TAAGCAGACT CGTCTTACTC ACTCAAACAG CTGGTTAGGC
GATAAACGCT TCGCTAAGCA AGAGAGCATT GAGTTCAAGG CCCGTGATGG CGTGGAGATT
GGTGGAGTGT TGATCTACCC ATTAGATCAT AAGGAAGGTC AACGTTACCC GCTCATCATG
TCGGTACACG GCGGCCCCGA GAGTCATGAC AAAGATGGTT GGGTCACCAA CTACTCACGT
CCGGGTCAGA TGGCTGCAGC GCAAGGCTAT GCCGTCTTCT ATCCCAATTA TCGCGGCAGT
ACGGGTAAAG GAGTCGACTA CTCTAAACTT GGACAAAACG ATTATGCGGG TAAAGAGTTT
GATGATCTGG TGGACTTTAA AGATCACTTA GTCGACATGG GGTTAGTAGA CAGTAAGAAA
GTCGGTATTA CAGGCGGCTC TTACGGCGGT TATGCTTCGG CATGGGCGGC AACAAAACTG
ACCAAACATT TCGCCGCAAG CGTAATGTTT GTCGGTGTGA CCAACCAGTT GTCTAAGTTT
GGTACCACAG ATATCTCTAA CGAGATGCAC TTAGTACATG CCCGCTCATA CCCTTGGGAC
AAGTGGCAAT GGTATCTGGA GCGCAGCCCT ATCTACTGGG CGGGTCAATC AGAGACACCA
CTACTGATCA TGCATGGTAA AGATGATCCT CGCGTTCATC CGGCTCAATC TATGGAGCTT
TACCGCTACA TGAAAGTTCA GGGGAAAGAT GTACGCCTGG TCTATTACCC GGGTGAAGGT
CACGGTAACA AAAAAGTCGC TGCCCAGTAT GATTACAACC TGCGTCTGAT GCGCTGGATG
GATCACTATC TGAAAAATGA TGGTAAAGAG ATGCCCGACT ACAAGCTTGA TCATGAGGCT
AAATTAGAGC AGATAACCAA GGCTGACGCA GAGTAA
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| Protein sequence | MNNKIKHAKH ALAVAIGLLS FSASASEAIT AEELATLQQV TQVQVSPDGD SVAFTRSVPR
KLYQDKDGLN WGELYIVDDK GVERPYITGE VNIKQIQWSK DGTLIYFLAK MGDDEFVTLY
QIPFDGGQAL KTMALDGTDI GHFSLSEDNK QIALLAMPAK EKSEKKLKEL GFKAEIYEEN
LKNKQLFVVD LAVTDKPLKP IAWEIEDYVS DMHWSPEGET LLIKTQPTAL IDDKYMKSKW
QIVNIATQQT VTTFITEGKL GAAEFSHDGK YIAIHGAEDK HDPATGRLFL GNVKSGEVTD
WLPDFKGHVA DFEWANDENT LYLIANVDTQ SVVATIKPGK TKYKEVVKGG KFIAGKLSIS
DSDATVTLKG NTAEHPNEVF MLRGSKHKQT RLTHSNSWLG DKRFAKQESI EFKARDGVEI
GGVLIYPLDH KEGQRYPLIM SVHGGPESHD KDGWVTNYSR PGQMAAAQGY AVFYPNYRGS
TGKGVDYSKL GQNDYAGKEF DDLVDFKDHL VDMGLVDSKK VGITGGSYGG YASAWAATKL
TKHFAASVMF VGVTNQLSKF GTTDISNEMH LVHARSYPWD KWQWYLERSP IYWAGQSETP
LLIMHGKDDP RVHPAQSMEL YRYMKVQGKD VRLVYYPGEG HGNKKVAAQY DYNLRLMRWM
DHYLKNDGKE MPDYKLDHEA KLEQITKADA E
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