| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1592 |
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| Symbol | |
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| ID | 5612026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1902147 |
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| End bp | 1902650 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640932462 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473331 |
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| Protein GI | 157374731 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1451] Predicted metal-dependent hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.18877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACAC TCAAATACTT AGCCGGTTAT CAACAGCCAA TACAAGATCA GGTATCCGAA
CTACTCGCCA ATGGCAAGCT TAAAGCGATA CTGCTTAGCA GGCACCCGGA TATTCATGCT
ATTCGTACTG ACAGAGCCTT ATACGATTAT ACAATAGAGA TAAAAAACCA GTATTTGCGC
AAGTCCCAAC CCCTGTCGAA GATCCAATAC GATGATAAGA TCAGCTTAAG CCATCAGGCT
CTGGGTCTTC ACTCATTCGT ATCCAGAGCC CAAGGCAGAA AGACGAAAGC TAAGAACGAG
ATCCGCATAT CGTCACGCTT AAAGAAAGTT CCGGAGCCGT TATTACGTAT GGTCGTCGTT
CATGAACTCG CTCACCTCAA AGAGAAAGAT CATAACAAGG CCTTCTACCA ACTCTGTTGT
CATATGGAAG CAGATTATCA TCAACTGGAG TTCGACTTAA GGTTACTGCT AACCTTACTC
GACAGCGGCG TTAAGGTTTA CTAA
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| Protein sequence | MNTLKYLAGY QQPIQDQVSE LLANGKLKAI LLSRHPDIHA IRTDRALYDY TIEIKNQYLR
KSQPLSKIQY DDKISLSHQA LGLHSFVSRA QGRKTKAKNE IRISSRLKKV PEPLLRMVVV
HELAHLKEKD HNKAFYQLCC HMEADYHQLE FDLRLLLTLL DSGVKVY
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