| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1539 |
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| Symbol | |
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| ID | 5612124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1836651 |
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| End bp | 1837505 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640932405 |
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| Product | bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase |
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| Protein accession | YP_001473278 |
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| Protein GI | 157374678 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00454653 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000334608 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAGCTC AAAGAATCGA TGGAAAAGCG ATCGCTCAAT CCATTCGAAC ACAGCTAAAA
GAAAAAGTTA CCGCCCGCAA AGAGGCAGGA CAGAGGGTTC CTGGTTTAGC CGTGATTCTA
GTCGGTGCAG ATCCCGCTTC ACAAGTTTAT GTCGGCAGTA AGCGACGCGC TTGCGAAGAG
GTCGGGTTTT TATCCCGCTC TTATGATTTA GATACCACGA CATCTGAAGC AGAACTGCTT
ACTCTTATCG ACGAATGCAA CGAAGACCCG GCTATCGATG GTATCTTAGT TCAGCTGCCT
CTTCCGGAAC ATATTGAAGA GTCGAAAGTG ATCGAACGGA TCAGACCCGA TAAAGATGTC
GACGGTTTCC ACCCCTATAA TGTAGGCAGA CTCGCTCAGC GTATCCCAGT GCTTCGCTCA
TGCACGCCGA TGGGTATCAT GACTTTGATT AAGACGACGG GGATTGATAC TTATGGTTTA
GATGCTGTCA TCGTGGGTGC TTCGAACATA GTAGGTCGCC CTATGAGCCT CGAACTGCTC
CTCGCAGGGT GTACGACAAC AACGTGTCAC CGTTTCACTC GAAATCTTGA ACAGAAAGTC
AGACAGGCCG ATCTGCTGGT TGTGGCCGTA GGTAAGCCAG GTTTCATTCC AGGAGAGTGG
ATTAAACCTG GCGCTATCGT CATAGATGTA GGCATCAACC GCCTCGAAGA TGGCAGTTTA
GCCGGTGATG TGCAATTTGA TGCTGCATCA GAAAATGCCA GTTTCATCAC CCCTGTCCCT
GGTGGCGTAG GACCAATGAC CATTGCCAGC CTGCTCGAAA ATACCCTTTA TGCGGCTGAG
CAGTATCATG ACTGA
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| Protein sequence | MTAQRIDGKA IAQSIRTQLK EKVTARKEAG QRVPGLAVIL VGADPASQVY VGSKRRACEE
VGFLSRSYDL DTTTSEAELL TLIDECNEDP AIDGILVQLP LPEHIEESKV IERIRPDKDV
DGFHPYNVGR LAQRIPVLRS CTPMGIMTLI KTTGIDTYGL DAVIVGASNI VGRPMSLELL
LAGCTTTTCH RFTRNLEQKV RQADLLVVAV GKPGFIPGEW IKPGAIVIDV GINRLEDGSL
AGDVQFDAAS ENASFITPVP GGVGPMTIAS LLENTLYAAE QYHD
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