| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1536 |
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| Symbol | |
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| ID | 5610726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1833661 |
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| End bp | 1834389 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640932402 |
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| Product | UDP-2,3-diacylglucosamine hydrolase |
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| Protein accession | YP_001473275 |
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| Protein GI | 157374675 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2908] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01854] UDP-2,3-diacylglucosamine hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.318916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0416133 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGAACAC TTTTTATTGG CGATCTGCAC TTAAGTGCTG ATCGCCCTGA TATTACTCGT
GCATTTATCG ATTTTCTCGA TAGCCAGCTT GATGATGTTC AAGCCCTATA CATTTTAGGC
GACCTGTTCG AAGTCTGGAT AGGTGATGAT TTGGCCGAAC CTTTCGCTAT CGACTTAGCT
AAAAAGCTAT ATCGCTTATC CAAGCGTATG CCCGTCTACT ACATTCATGG AAATCGCGAC
TTCCTTCTAG GGCATGATTA CGCCCAAAAA GCCGGTATAA CCTTGTTGCC AGAAATCCAT
TGTATCGACC TATACGGCGT ACCAACGGTT ATTCTCCATG GCGATAGCCT ATGTACCTTA
GATAAAGCCT ATCAAAGGTT CAGACGATTC AGAAACCTCA AGCTTGCAAA ATGGATCTAT
GCTCATCTGC CCCGTAACAC CAGACAAAAT ATTGCCCGCA ATATCAGAAG CAAAAGTACC
CAAAGCAATA TGCAAAAGAG TGTTTCTATC ATGGATGTCG AGCAGGATGC GGTAGCTGCG
CTTCTTAAAA GCACACAGAC GGTACAGATG ATCCACGGAC ACACTCACAG ACCCGATATA
CACGAGATGA AATCGAGTTC AGGAGTCGCA CTCAAACGTG TCGTCGTTGG TGATTGGTAT
GAACAAGCCA GTGTATTAAG CGTATCGGCA GACAAATTAG ATCTATCAGC GATTCCTTTC
GAGAAATAA
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| Protein sequence | MRTLFIGDLH LSADRPDITR AFIDFLDSQL DDVQALYILG DLFEVWIGDD LAEPFAIDLA
KKLYRLSKRM PVYYIHGNRD FLLGHDYAQK AGITLLPEIH CIDLYGVPTV ILHGDSLCTL
DKAYQRFRRF RNLKLAKWIY AHLPRNTRQN IARNIRSKST QSNMQKSVSI MDVEQDAVAA
LLKSTQTVQM IHGHTHRPDI HEMKSSSGVA LKRVVVGDWY EQASVLSVSA DKLDLSAIPF
EK
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