| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1484 |
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| Symbol | |
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| ID | 5610559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1760964 |
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| End bp | 1761344 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640932350 |
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| Product | MerR family transcriptional regulator |
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| Protein accession | YP_001473223 |
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| Protein GI | 157374623 |
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| COG category | [K] Transcription |
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| COG ID | [COG0789] Predicted transcriptional regulators |
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| TIGRFAM ID | [TIGR02044] Cu(I)-responsive transcriptional regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.944176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.368372 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAATTG GTGAGGTTGC TAAACAGACA GGATTATCAG TTAAGAGTAT TCGCTATTAT
CATGATATCG GACTCATCTG TGCCACCCGA GGTGAAAACG GATACCGTGA ATATGACCAG
CCACAGATTG AGTCACTAAA ATTCATCCAC CACAGCAGAG AGCTCGGATT TTCACTCGAT
GACTGCAGAT CACTACTTGA CCTTAAACTT AATCAGGCGA GAGATGCCGA GGACGTTAAA
AATTTAGCTA AGGCACATCT CGAGCTGGTC AGTGAGCGGA TCATTAAGCT TCAGGCGCTC
GAGGCACAAC TGAAACATCT GGTGGACGAT TGCCGCGGGG GGCACCAGCC GGATTGCTCG
ATCATCAATA GTTTAAGTTG A
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| Protein sequence | MKIGEVAKQT GLSVKSIRYY HDIGLICATR GENGYREYDQ PQIESLKFIH HSRELGFSLD
DCRSLLDLKL NQARDAEDVK NLAKAHLELV SERIIKLQAL EAQLKHLVDD CRGGHQPDCS
IINSLS
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