| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1481 |
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| Symbol | |
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| ID | 5610696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1756141 |
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| End bp | 1758075 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640932347 |
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| Product | radical SAM family protein |
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| Protein accession | YP_001473220 |
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| Protein GI | 157374620 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1032] Fe-S oxidoreductase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.177835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.151823 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTTC TTCTAATGAC TCCACCTATG ACCCAGCTGA ATACGCCCTA TCCGGCAACA
GCGTATTTAA CGGGTTTTTT ACGCTCTCGA GGCTATGAGG CGGTTCAGCG AGATCCTGCT
ATTGAGCTTT TCCTGGAGAT GATGACAGCG CCTGCGCTGG AGATTATTCG TCAGCATGTG
GAAGAAAACT TCGAGCACCT TGAAGACAAT GAGCTACCTG ATGCAATCTT TAATTTTCTG
GCTGAGTTTG ACCGTTACCA TCAGACAGTT GAGAGCGCGA TTCGTTTTTT GCAGGGCAAA
GATCCAAGCC TTGCGCTGCG TATTAACTCC CGTCGTTTTT TACCAGAAGG GCCAGCGTTT
GACGCTATTG CTCAGATGGA AGCGGTATCC GGCGATGTGT TGCAAGCAGC CTTTGGTAAT
TTAGGCGTAC AAGATAAAGC TAAATATCTA GCAACGCTGT TTATTAACGA TCTCTCAACC
GTCATTACTC AGGGGGTTGA TCCCTACTTT GAAGTGAGCC GTTATGGTGA GCAATTAGCG
GCTGCCAACC CAAGCTTTGA TAATCTCTAC GATACCTTGA TGGGCGAACC TAGTTTCAGC
TCGGAAATTT TGGAACAGTT AGTTGAGCAC TATCTGGAAG AAACTCAACC TAGCGTCGTC
GCGTTAACCG TGCCTTTCCC CGGCAATATG CTGGGAGCCC TGCGTATCGC GCAAACCTGT
AAAGCGATCA ATCCCGGCAT TCCCATCGTA ATGGGCGGTG GTTTTATCAA TACCGAGCTG
CGTGCGCTGA AGGACCCTCG AGTATTTGAG TTTGTCGACT TTATCTGTCT GGACGACGGC
GAACGTCCTT TTATCACGCT ACTCGAATAC TTTGAAGGAC AGCGTGAGGT AGACTCACTG
ATGCGAACCT ATCTGCTCGC AGAGGATGAA AATGGGGAGG CCTACGTACA CTTCAATGAA
AATACAGAGC TCCAGGATAT CCCACAAACT GATGTTGGTG CACCGGTATA CGACGGCCTG
CCACTTGGGG AATACCTCTC TTTGTGTGAA ATGCTCAATC CTATGCACCG CATCTGGAGC
GATGGACGCT GGAATAAACT GACCATAGCT CATGGCTGCT ACTGGCGAAA ATGCAGCTTT
TGCGATGTAA GTCTGGACTA TATCGACCGT TTTGATGCCG CTAGCGCCGA TATTCTGGTG
GATAGAATCG AGCAACTCAT CGAAGAAACC GGAGAGACAG GTTTCCACTT CGTCGATGAA
GCCCTACCGC CAAAGCTTTT GTTTGCGATG GCAAAGCGGC TCATTGAACG CAATGTGGTG
ATCAGCTGGT GGGGAAATAT CCGCTTTGAG AGGACGTTTA GCCAAGCGCG TTGCCAGTTG
CTTGCTGACT CTGGTTGTAT CGCTGTTAGC GGTGGACTTG AGGTGGCATC AGATCGTCTA
TTGAAACTGA TGAAAAAGGG CGTGAGTGTT GAGCGGGTCG CCCAGGTAAC CAAAGCCTTC
AGTGATGCAG GTATATTGGT TCACGCCTAT TTGATGTATG GCTTTCCAAC ACAAACCGAG
CAAGAAACCG TTGATTCGCT GGAGATGGTG CGTCAGATGA TGAAAGAAGG TTGTTTCCAA
TCCGCCTACT GGCACCGTTT TGTGGCCACG ATTCACAGCC CTATTGGCAT AAACCCGGAG
AAGTTTGGCA TCACGCTTGC TGAGCGCCCT GAGATCTTAT TCGCTGAAAA CGATGTGGAC
TTCACCGATC CAACCGGTAC GGATCATGAA ATGCTTGGCG AAGGGCTTCG TAAGGCGATC
TACAACTATA TGCACGGTAT TGGCTTTGAT CAGCCGATGA GTTTCTGGTT TAACCAACCT
GTTGCACGCA CTAAGATGAA AAAAGACCTG GTATCAAAAG CGATTAACAA TCTCATCACC
GGCAATGAAG ACTAA
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| Protein sequence | MTVLLMTPPM TQLNTPYPAT AYLTGFLRSR GYEAVQRDPA IELFLEMMTA PALEIIRQHV
EENFEHLEDN ELPDAIFNFL AEFDRYHQTV ESAIRFLQGK DPSLALRINS RRFLPEGPAF
DAIAQMEAVS GDVLQAAFGN LGVQDKAKYL ATLFINDLST VITQGVDPYF EVSRYGEQLA
AANPSFDNLY DTLMGEPSFS SEILEQLVEH YLEETQPSVV ALTVPFPGNM LGALRIAQTC
KAINPGIPIV MGGGFINTEL RALKDPRVFE FVDFICLDDG ERPFITLLEY FEGQREVDSL
MRTYLLAEDE NGEAYVHFNE NTELQDIPQT DVGAPVYDGL PLGEYLSLCE MLNPMHRIWS
DGRWNKLTIA HGCYWRKCSF CDVSLDYIDR FDAASADILV DRIEQLIEET GETGFHFVDE
ALPPKLLFAM AKRLIERNVV ISWWGNIRFE RTFSQARCQL LADSGCIAVS GGLEVASDRL
LKLMKKGVSV ERVAQVTKAF SDAGILVHAY LMYGFPTQTE QETVDSLEMV RQMMKEGCFQ
SAYWHRFVAT IHSPIGINPE KFGITLAERP EILFAENDVD FTDPTGTDHE MLGEGLRKAI
YNYMHGIGFD QPMSFWFNQP VARTKMKKDL VSKAINNLIT GNED
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