| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1457 |
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| Symbol | |
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| ID | 5610890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1728064 |
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| End bp | 1729671 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640932323 |
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| Product | propionyl-CoA carboxylase |
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| Protein accession | YP_001473196 |
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| Protein GI | 157374596 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.883387 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTCAAC TTAGCAGTCG AATTAATTCC CGTAGCGATG AATTTAAGGC CAAACATGAA
GATATGGCGG CCCTTGTTCA AGATCTTAAA TTAAAGATTA ATGAGATTGA ACTGGGCGGC
GGAAGCGTTG CCCGCGAACG TCATCTCTCA CGGGGTAAAC TTCTCCCTCG CCAGCGAGTC
GAAAAGCTGT TAGATCCTGG CTCTCCCTTC CTTGAACTGT CACAGTTTGC TGCATTTGAG
CTCTATGAAG ATGTGGTGCC ATCGGCAGGT ATCATTGCCG GTATCGGACG CGTGAGCGGT
GTAGAGTGCA TGGTCATCGC AAACGATGCC ACAGTCAAAG GGGGCACTTA CTATCCTGTT
ACGGTGAAGA AGCACCTGCG AGCACAAGAG ATCGCGAGTC GTTGTCACCT CCCCTGTATC
TACCTCGTTG ACTCAGGCGG CGCTAACCTG CCCCGCCAGG ATGAGGTATT TCCGGACCGC
GATCATTTCG GCCGCATCTT CTACAACCAG GCACAGATGT CAGCCAAAGG GATCCCGCAG
ATAGCCGTCG TCATGGGGCT TTGCACCGCA GGTGGCGCCT ATGTTCCCGC CATGGCCGAT
GAGTCAATAA TCGTTAAAGA GCAAGGGACC ATCTTCCTGG CCGGTCCACC ACTGGTTAAG
GCTGCAACCG GCGAAGAGGT CACCGCCGAA GAGCTGGGCG GCGCCGAAGT CCACACAAAA
ATTTCCGGTG TTGCCGATCA TATGGCGCAC AGTGACGAGC ATGCCCTCGA ACTTGCCCGC
AAAGCCGTGA CTAGGCTCAA TCATCAAAAA GAGATCCTGG CACAATTAAG CCCGGTCAAA
CCGCCGAAGT TCGATATCAA TGAGCTGTAC GGCATTGTCG GTACCGATCT GAAGAAACCC
TATGATGTCA GAGAGGTGAT CGCGCGTGTC GTCGATGATT CTGATTTCGA TGAGTTTAAG
GCTAACTACG GCAACACCTT AGTCTGTGGC TTTGCCCGCA TACATGGATA CCCTGTCGGC
ATCGTCGCCA ACAATGGCAT CCTCTTCTCC GAATCGGCTC AAAAAGGTGC TCACTTCATC
GAGTTGTGCT GCCAGCGAAA GATCCCTCTG CTTTTCCTGC AAAACATCAC CGGCTTCATG
GTGGGCAAGA AGTATGAACA TGAGGGCATC GCTAAACATG GTGCCAAGAT GGTCACCGCT
GTGTCCTGCG CCAATGTCCC CAAATTCACC GTCATCATAG GCGGCAGTTA TGGTGCGGGT
AACTATGGCA TGTGCGGACG AGCATTCGAA CCCACCATGA TGTGGATGTG GCCCAACGCC
AGGATATCTG TGATGGGTGG CGAACAAGCC GCCGGGGTAC TAGCCACCGT TCGCAGAGAT
GGCTTAGCTC GCAAAGGGGT GGAGTGGTCG GCCGAGGAGG AGCAAGAGTT CCGCGAGCCA
ATCGTCAAAC AATATGACAA GGAGGGCCAT CCTTATCACG CCAGTGCACG CCTTTGGGAT
GACGGTATCA TCGACCCGGC GCAGACCCGA GATGTCGTCG GTTTAGCCCT CTCTGCGGCG
CTGAATGCGC CTGTTGAAGA GACTAAGTTT GGTGTATTCC GTATGTGA
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| Protein sequence | MTQLSSRINS RSDEFKAKHE DMAALVQDLK LKINEIELGG GSVARERHLS RGKLLPRQRV
EKLLDPGSPF LELSQFAAFE LYEDVVPSAG IIAGIGRVSG VECMVIANDA TVKGGTYYPV
TVKKHLRAQE IASRCHLPCI YLVDSGGANL PRQDEVFPDR DHFGRIFYNQ AQMSAKGIPQ
IAVVMGLCTA GGAYVPAMAD ESIIVKEQGT IFLAGPPLVK AATGEEVTAE ELGGAEVHTK
ISGVADHMAH SDEHALELAR KAVTRLNHQK EILAQLSPVK PPKFDINELY GIVGTDLKKP
YDVREVIARV VDDSDFDEFK ANYGNTLVCG FARIHGYPVG IVANNGILFS ESAQKGAHFI
ELCCQRKIPL LFLQNITGFM VGKKYEHEGI AKHGAKMVTA VSCANVPKFT VIIGGSYGAG
NYGMCGRAFE PTMMWMWPNA RISVMGGEQA AGVLATVRRD GLARKGVEWS AEEEQEFREP
IVKQYDKEGH PYHASARLWD DGIIDPAQTR DVVGLALSAA LNAPVEETKF GVFRM
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