| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1449 |
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| Symbol | |
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| ID | 5610882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1720444 |
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| End bp | 1721022 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640932315 |
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| Product | thymidine kinase |
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| Protein accession | YP_001473188 |
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| Protein GI | 157374588 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1435] Thymidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000965494 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCGCAAC TCTATTTTTA TTACTCGGCG ATGAATGCCG GTAAATCAAC TTCTTTATTA
CAGTCCTCTT ATAACTACCG CGAACGCGGA ATGAATACCT TAGTGATGAC GGCATCTATC
GATGACAGAT ATGGAGTAGG TAAAGTCGCG TCAAGGATCG GTATAGAAAC CGAGGCTCAG
GTGTTTGCAA GCGGCGATAA TCTGGCCAAT ATGATTGAAG CTGCACTCGA AGAGCAGCCG
CTGCATTGTA TCTTGATTGA CGAGTCACAG TTCTTAAGCA AAGAACAGGT AAAACAGTTG
ACTCACGTCG TCGATAACTT GGATATTCCC GTCCTGTGTT ATGGTCTTAA AACCGACTTC
CAGGGTGAAC TTTTCACTGG TAGTCAATAT CTGGTCGCAT GGGCCGATAA GTTAGTCGAA
CTTAAGACTA TCTGTCACTG TGGCCGAAAG GCGAACATGG TCGTGCGCCT CGATGGTGAA
GGTAAGCCGA TGCAGGAAGG CGAGCAGGTA GCGATAGGTG GCAATGAGAG TTACGAGTCA
GTTTGTCGTA AACACTTCAG AGAGTTCCTT TGGGATTAG
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| Protein sequence | MAQLYFYYSA MNAGKSTSLL QSSYNYRERG MNTLVMTASI DDRYGVGKVA SRIGIETEAQ
VFASGDNLAN MIEAALEEQP LHCILIDESQ FLSKEQVKQL THVVDNLDIP VLCYGLKTDF
QGELFTGSQY LVAWADKLVE LKTICHCGRK ANMVVRLDGE GKPMQEGEQV AIGGNESYES
VCRKHFREFL WD
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