| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1341 |
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| Symbol | |
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| ID | 5610930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1596266 |
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| End bp | 1596835 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640932206 |
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| Product | putative lipoprotein |
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| Protein accession | YP_001473080 |
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| Protein GI | 157374480 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00268947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAAAT ACAAATTAGT GTTCCTACTT TTACCTGTTT TACTTGTCGG TTGCGCTACG
GGAAATACGC CTGAAGCGAA AAAGAAAAAT GCACGTGAGG AAACGCAGGC TGCATTGAAA
GAGATCTATA GTGAACACAA AGGTGCCGCT TCTGCAGTGG CTAACTCGGT TGCCTATGTC
ACCTGTACTG GCAGTAACAG CTATCTGTTT GCCATATCTA CCGGAGGCGG AGTTTGTGTG
CTCAATGAAC TGGGGCGCAA GTCATATTAT CGTTTCGCCA CTGGTGGTGT TGGTGCAGGC
ATTGGCTGGA AGCAGGTCGC ATTCGTGCAA GCTTTTATGG ACAAGGCTGC CGTTCAGCGC
TTTAAGGATG CAGGTTTCGA GGGGCAAGCG CAGGCAGAAG CCAGCGCCGA GTACGAGGGA
AGTGGCGAGC AGGCATCTGC TAATCAGTCT GTGGATCTCA GTGGTGTCAA AACCTATCAG
GTTAATTTAA TGGGGGCCGC CGCTCAGGCT ACGGTTCAGG GCTACAAATA CTGGGAAACG
AACTTTGAAG ATGACTTTGT TGAAAACTAG
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| Protein sequence | MKKYKLVFLL LPVLLVGCAT GNTPEAKKKN AREETQAALK EIYSEHKGAA SAVANSVAYV
TCTGSNSYLF AISTGGGVCV LNELGRKSYY RFATGGVGAG IGWKQVAFVQ AFMDKAAVQR
FKDAGFEGQA QAEASAEYEG SGEQASANQS VDLSGVKTYQ VNLMGAAAQA TVQGYKYWET
NFEDDFVEN
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