| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1326 |
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| Symbol | |
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| ID | 5611026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1576280 |
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| End bp | 1577563 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640932191 |
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| Product | sodium:dicarboxylate symporter |
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| Protein accession | YP_001473065 |
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| Protein GI | 157374465 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.027246 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGCAGA CCATTAAACA GATCCCCTTC TGGCAAAAAG TTCTCGCGGG CTTCATTTTA
GGCGCGTTAA CAGGCGTAAT TTTTGGCGAA TCGGCAACCA TCCTCAGACC TCTGGGTGAT
CTCTTTATCA GCGCCATAAA AATGCTGGTC GCCCCTTTAA TCTTATGTGC CATCGTCGTC
AGCATTACCT CCTTAGGCTC ACAGGTAAAC CTGAAACGTT TGAGCTTTAA AACTCTGGCC
ATGTTTATGT TTACCGGCAC ACTCGCCTCA CTCATTGGTC TCACTGTTGG TTCCCTGATT
GACATGGGCG GCTCTATGGA GCTGGTTGCA ACTGAAGTAC GTGAACGTGA TGTTCCCGGG
TTCGCTCAAG TATTATTGAA CATGATCCCC GTTAATCCTT TTGCCTCTCT GGCCGAAGGC
AAGGTACTTC AGATCATCGT CTTTGCAGCC TTAATTGGTA TCGCAATCAA TAAAGTGGGT
GAGAAAGCCG AGCCCCTGAA ACGCGGTTTC GAAGCTGGTG CAGAGGTCAT GTTTCAGTTA
ACCCGCATGG TATTACAATT GACCCCTATC GGCGTCTTCG GTTTGATGGC TTGGGTAGTC
GGTGAGTATG GTTTATCCAC ACTTCTACCA TTAGGTAAGT TTATTGGTGC TATCTATCTG
GCTGCACTCA TACATATCAT TTTTGTTTAC GGTGGTCTGA TAAAATTCGC AGCGAAACTC
AGCCCGGTTC AATTTTTCAG AAAGGCAATG CCGGCTCAGT TAGTAGCTTT CACTACCGCG
TCTAGCTTCG GCACTCTGCC GGCCAGCACG CGCTGCAGCG AGTCTATGGG AGTGTCTAAG
CAATATGGTT CTTTTGTCCT GCCATTAGGG GCCACGATGA ATATGGACGG TTGTGGTGGT
ATCTACCCGG CAATCGCCGC CATCTTTATT GCGCAGATCT ATGGCATACC ACTCGATATG
ACTGACTATA TGCTCATCGC CGTGACAGCG ACGGTAGCAT CGGTAGGTAC CGCAGGTGTA
CCAGGAAGCG CCATGGTCAT GTTATCTGTA ACTCTGGGAG TCGTCGGTTT ACCTCTGGAA
GGTATCGCAT TTATCGCTGC CATCGACCGT ATCATCGACA TGATAAGAAC CAGCACCAAT
GTCACCGGCG ATATGATGAC AGCAGTTGTT ATCGGGAAAT CTGAGGGCCA GCTCGATGAG
CAGCAATTTT ATGCCAATGA TGAAGCCGTA GGTGAGGATG CTTCCGAAGC GCTATTAGCC
AAATCTAAGC CGGTATCGGA GTAA
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| Protein sequence | MWQTIKQIPF WQKVLAGFIL GALTGVIFGE SATILRPLGD LFISAIKMLV APLILCAIVV
SITSLGSQVN LKRLSFKTLA MFMFTGTLAS LIGLTVGSLI DMGGSMELVA TEVRERDVPG
FAQVLLNMIP VNPFASLAEG KVLQIIVFAA LIGIAINKVG EKAEPLKRGF EAGAEVMFQL
TRMVLQLTPI GVFGLMAWVV GEYGLSTLLP LGKFIGAIYL AALIHIIFVY GGLIKFAAKL
SPVQFFRKAM PAQLVAFTTA SSFGTLPAST RCSESMGVSK QYGSFVLPLG ATMNMDGCGG
IYPAIAAIFI AQIYGIPLDM TDYMLIAVTA TVASVGTAGV PGSAMVMLSV TLGVVGLPLE
GIAFIAAIDR IIDMIRTSTN VTGDMMTAVV IGKSEGQLDE QQFYANDEAV GEDASEALLA
KSKPVSE
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