Gene Ssed_1291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_1291 
Symbol 
ID5611176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp1534919 
End bp1535218 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content47% 
IMG OID640932144 
Productseptum formation initiator 
Protein accessionYP_001473030 
Protein GI157374430 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG2919] Septum formation initiator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000132598 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACGTC TCCTGTTTGT ATTAGTAGCC CTGCTAGGCT TACTTCAATA CCAGCTTTGG 
TTAGGGGTAA ATAGCCTACC TGAATCGTTT CACCTGCGAG AGCAGATAGG TTTCCAGCAA
GTGAGTAATG CTAAATTAGT CGCGCGAAAT GAAGTCTTGC GGGAGGAGAT CAGCGATCTT
CGCAGCGGCA CTGAGGCATT AGAGGAGCGT GCCCGGAATG AATTAGGCAT GGTAAAGAAA
GGTGAGACAT TTTTCAGAGT CGTTGGAGGT CAACGTCAGT CTCTAAATGC GTCAAACTAA
 
Protein sequence
MKRLLFVLVA LLGLLQYQLW LGVNSLPESF HLREQIGFQQ VSNAKLVARN EVLREEISDL 
RSGTEALEER ARNELGMVKK GETFFRVVGG QRQSLNASN