| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1258 |
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| Symbol | |
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| ID | 5613899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1493116 |
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| End bp | 1494264 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640932111 |
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| Product | iron-containing alcohol dehydrogenase |
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| Protein accession | YP_001472997 |
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| Protein GI | 157374397 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1454] Alcohol dehydrogenase, class IV |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0709057 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCTA AATTTTTCAT ACCGTCGGTC AACGTGTTAG GACAAAACGC AGTTGACGAA
GCTATCGGAG ACATCAAAAC ATTAGGCTTC AAAAGAGCAT TAATTGTTAC CGATAAACCA
CTGGTCGAAA TTGGTCTCGT TGGACAAGTT GCAGATAAGC TAGGCAGTGC CGGCATCGAA
GTCACAATCT TCGATGGCGT TCAGCCAAAT CCAACTTCGG GTAACGTTGA GGCTGGTCTT
GAGTTACTCA AAGCCAATGA CTGTGACTTT GTTGTCTCTC TGGGTGGTGG TTCACCTCAT
GATTGCGCTA AAGGTATCGC CTTAGTGGCA ACGAACGGAG GCAGCATCAA AGATTATGAA
GGTCTTGATG TTTCTACTAA GCCTCAACTG CCACTTGTTG CGATCAACAC GACAGCGGGT
ACAGCGAGTG AGATGACACG TTTCTGTATC ATCACCGACG AAGCTCGTCA TATTAAGATG
GCCATTGTCG ATAAGCACAC AACCCCTATT CTATCTGTCA ACGATCCTGA GTTGATGTTA
GCAAAACCAG CTGGCCTAAC GGCTGCTACG GGTATGGATG CACTGACTCA CGCAGTTGAA
GCTTATGTTT CTATCGCAGC GAACCCAATC ACAGACGCCT GTGCGATCAA GGCTATCGAG
CTTATCAAAG CTAACCTAGT TGAAGCCGTT GATAATGGTC AGAGTATCGA TGCACGTGAT
CAGATGGCTT ACGCGCAATT CCTCGCGGGT ATGGCATTCA ATAACGCCAG CCTTGGTTAT
GTTCATGCAA TGGCACACCA ACTCGGTGGT TTCTATGACC TTCCGCACGG TGTATGTAAT
GCGCTATTAC TTCCACACGT TCAAGAGTAC AACGCACAAG TCGCTGCACC ACGTTTGAAA
GATGTCGCTA AAGCTATGGG TGTTGACGTA ACTGCTATGG ATGATACTCA AGGCGCTAAA
GCAGCAATCG ATGCTATCAA AGCACTTTCT GTGGCTGTGA AGATCCCTGA AAACCTCACT
AAGCTAGGCG TGAAAGCGGA AGATATTCCA ACACTCGCCG ATAACGCTCT TAAAGATGCA
TGTGGTTTTA CAAACCCTAA GCAAGCGACA CATGAAGAGA TCTGTCAGAT CTTTACTAAC
GCTTTGTAA
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| Protein sequence | MAAKFFIPSV NVLGQNAVDE AIGDIKTLGF KRALIVTDKP LVEIGLVGQV ADKLGSAGIE
VTIFDGVQPN PTSGNVEAGL ELLKANDCDF VVSLGGGSPH DCAKGIALVA TNGGSIKDYE
GLDVSTKPQL PLVAINTTAG TASEMTRFCI ITDEARHIKM AIVDKHTTPI LSVNDPELML
AKPAGLTAAT GMDALTHAVE AYVSIAANPI TDACAIKAIE LIKANLVEAV DNGQSIDARD
QMAYAQFLAG MAFNNASLGY VHAMAHQLGG FYDLPHGVCN ALLLPHVQEY NAQVAAPRLK
DVAKAMGVDV TAMDDTQGAK AAIDAIKALS VAVKIPENLT KLGVKAEDIP TLADNALKDA
CGFTNPKQAT HEEICQIFTN AL
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