| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1217 |
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| Symbol | |
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| ID | 5613946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1451830 |
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| End bp | 1452408 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640932070 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472956 |
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| Protein GI | 157374356 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2353] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000670198 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.302127 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAA AAGGTTTATT AGCAACAGCA TTAACGGCCT CGATGTTACT GAGTGGAGCG
GCAGTTGCTG CGGATTATGT GATCGATACA GAAGGTGCCC ACGCTTCAAT TCAGTTTAAG
GTAAGTCACT TAGGCTACAG CTTTGTCGCG GGTCGCTTTA ATGATTTTAA GGGTGACTTC
AGTTTCGATG CCGACAAGGT ATCTGATGCT AAGGTCAATG TGACTATTAA TACCAGTAGT
GTTGACTCTA ACCATGCTGA GCGTGATAAG CATCTTCGTA GCCCTGACTT TTTAAATACA
GGAAAATTCC CTCAAGCAAC ATTTGTCTCA ACTTCGGTTG TCGATCAGGG TAATGGTGCG
TTCCTGCTTA ATGGTGACTT CACCCTTAAC GGTGTAACTA AGGCGATAGC GATAGAGGCA
AATACCGTCG GAGAGGGCCA GGACCCTTGG GGCGGATATC GTGCAGGTTT TACAGGTAGC
GCCGAATTTG CATTAAAAGA TTATGATATC AAGATGGATC TGGGTCCGGC TTCTTCTCAT
GTAACCTTAG ACTTGGTCGT TGAAGGTGTT AGGAAATAA
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| Protein sequence | MMKKGLLATA LTASMLLSGA AVAADYVIDT EGAHASIQFK VSHLGYSFVA GRFNDFKGDF
SFDADKVSDA KVNVTINTSS VDSNHAERDK HLRSPDFLNT GKFPQATFVS TSVVDQGNGA
FLLNGDFTLN GVTKAIAIEA NTVGEGQDPW GGYRAGFTGS AEFALKDYDI KMDLGPASSH
VTLDLVVEGV RK
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