| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1216 |
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| Symbol | |
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| ID | 5610822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1451197 |
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| End bp | 1451748 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640932069 |
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| Product | cytochrome b561 |
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| Protein accession | YP_001472955 |
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| Protein GI | 157374355 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3038] Cytochrome B561 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000559854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.299312 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTCGCA ACACAACAAA TTCCTATGGA AGGATCACAA TATTAATCCA TTGGGTTTCA
GCACTGGCAG TGGTAGGGCT TTTTGCGGTG GGCTTTTGGA TGGTCGATCT GACTTATTAC
AGTACCTGGT ATAAAACCGC GCCTCATCTG CATAAGAGTT TTGGTGTCTT GTTGCTGATG
CTTACGCTCT TCAGATTAAT TTGGCGCCAG CTTAATCCTA AACCCGCAGC CGATCCGAAT
CATAAAGAGT GGGAAAAGAG GGCGGGTAAG TTGGCACACT CTGCTATTTA CCTGCTGTTA
TTGCTCATCA TGTTTAGTGG TTACCTAATT TCTACAGCCG ATAGCCGTGG CATTTGGGTA
TTTGGATGGT TTGAACTGCC TGGATTTGGT GCATTTATCG ATGACCAGGC CGATATTGCC
GGCTTAATCC ATCAATATGC CGCCTATAGC TTGGTGGGTT TGGCACTGAT ACACGCTCTT
GGGGCATTAA AGCACCACTT TGTCGATAAA GATTCAACGC TACTCAGAAT GGTGAAAGCA
AAGAGAGCTT AG
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| Protein sequence | MFRNTTNSYG RITILIHWVS ALAVVGLFAV GFWMVDLTYY STWYKTAPHL HKSFGVLLLM
LTLFRLIWRQ LNPKPAADPN HKEWEKRAGK LAHSAIYLLL LLIMFSGYLI STADSRGIWV
FGWFELPGFG AFIDDQADIA GLIHQYAAYS LVGLALIHAL GALKHHFVDK DSTLLRMVKA
KRA
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