| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1212 |
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| Symbol | |
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| ID | 5614019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1444582 |
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| End bp | 1445478 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640932061 |
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| Product | ATPase, BadF/BadG/BcrA/BcrD type |
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| Protein accession | YP_001472951 |
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| Protein GI | 157374351 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2971] Predicted N-acetylglucosamine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000148671 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGTGA ACCAGACGAA GGGGAAACCC TTGTTTATTG GTATTGATGG TGGTGGCAGT
AAATGCCGGG CAACGATCTA CTCTGGTGAG GATGCTGTAA TTGGTACTGG TGTCGCCGGG
CGCGCAAATC CACTTCACGG TTTATCTCAA ACATTTGAGT CGATTCAGCT ATCTACTGAG
CTCGCATTGA AAGATGCGGG AATGAACTTG AGTGACAGTA AAACCTTAGT CGCAGGTATC
GGTCTTGCGG GCGTTAATGT TCCCAGGCTT TATAATGATA TCGTTAACTG GGAACATCCG
TTTGCCAGTA TGTATGTGAC CACAGATCTG CATACTGCGT GCATCGGAGC ACACAAGGGT
GGAGATGGTG CCGTTATCAT TACCGGCACC GGTTCATGTG GCTACGCCAA TGTTAACGGT
AAAGAGTTAT GCCTGGGCGG ACATGGTTTT GCCTTAGGTG ATAAAGGAAG TGGCGCCTGG
TTAGGTTTAC AAGCTGCAGA GCAAGTTTTA CTTTATCTCG ATGGCTTCGC TAAAGAGACG
GAATTAACCG AGCGAGTTCT GAGTTATTTT AAGACTAAAG ATGCGTTGGG AATTGTTGAA
CAGCTGGCAG GGCAGTCATC CGGAACTTAC GCAAAACTTG CTCGTATCGT TCTTGAGTGT
GCCCATGCTA ATGACGAGGT CGCGCTTGGC ATAGTCAAAG AGGGCGCGGA TTATATCAGT
GAGCTGGCGC GCAAGTTATT TGAAATTGAA CCCCCTCGTT TCTCCATGAT TGGTGGTCTT
GCAGAGCCCT TGGCTCCATG GCTGGGTAAA GATGTGATTG CTAAGCTTTC ACCCACATTG
GCGCCACCGG AATTCGGGGC TGCATACTAT GCCCGTCAGC AGTTTCAGAA CAGATGA
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| Protein sequence | MSVNQTKGKP LFIGIDGGGS KCRATIYSGE DAVIGTGVAG RANPLHGLSQ TFESIQLSTE
LALKDAGMNL SDSKTLVAGI GLAGVNVPRL YNDIVNWEHP FASMYVTTDL HTACIGAHKG
GDGAVIITGT GSCGYANVNG KELCLGGHGF ALGDKGSGAW LGLQAAEQVL LYLDGFAKET
ELTERVLSYF KTKDALGIVE QLAGQSSGTY AKLARIVLEC AHANDEVALG IVKEGADYIS
ELARKLFEIE PPRFSMIGGL AEPLAPWLGK DVIAKLSPTL APPEFGAAYY ARQQFQNR
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