| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1194 |
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| Symbol | ileS |
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| ID | 5613824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1420891 |
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| End bp | 1423713 |
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| Gene Length | 2823 bp |
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| Protein Length | 940 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640932043 |
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| Product | isoleucyl-tRNA synthetase |
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| Protein accession | YP_001472933 |
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| Protein GI | 157374333 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0060] Isoleucyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00392] isoleucyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000135641 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACT ATAAATCTAC TTTGAATTTG CCGGAAACAG AGTTTCCGAT GCGTGGTAAT
CTGGCTAATC GTGAGCCAGT GATGTTGAAG TCCTGGACAG AAGATGGGCT GTATCAACAG
ATCCGTGATA GCCGTATTGG CCGTAAGCCT TTTATCTTAC ATGATGGTCC TCCATATGCG
AACGGCAGTA TTCATATAGG CCATTCAGTC AATAAGATCC TAAAAGACAT TATTGTAAAA
TCTAAGACAC TATCTGGTTT CGACGCACCT TACATTCCTG GCTGGGATTG TCATGGTTTG
CCTATCGAGC TAAAGGTCGA GCAGAAAGTC GGTAAGCCGG GACATAAAGT TACGGCTGCA
CAGTTTCGTG AAAAGTGTCG TGAGTATGCG GCTAAACAGG TCGATGGTCA GCGTGAAGAC
TTTATCCGTT TAGGCGTTTT TGCCGACTGG AATAAGCCTT ATCTTACGAT GGACTTCGAT
ACTGAAGCGA ATATCGTTCG TTCATTGGCA AAAGTGATCG ATAGCGGCCA CTTACATAAA
GGTGTTAAGC CTGTTCATTG GTGTACCGAT TGTGGTTCTG CTCTGGCAGA AGCCGAAGTT
GAATACGAAG ATAAGAAGTC TCCGGCTATC GATGTCGCTT TTGCTGCTAC CGATAAAGCT
GCGTTACTTG CTAAATTCGA TGTGCAGGAC TGTACTGGTT CGGCATCTAT GGTTATCTGG
ACGACCACAC CGTGGACATT GCCGGCAAAC AGAGCCTTGT CTGTTTCGCC TGAACTTGAT
TATGTTCTCG TTGAATTTGT AAAAGATGGC GCTACTTCGA CAGTTATTCT TGCCGATGCA
CTGGTAGAGT CTTGCATGGA GCGTTATGGA GTCGAGTCTC ATAAGGCGCT GGGAAAAGCT
AAAGGGCAAG AGCTTGAGCT GTTGCGTTTT AACCACCCTT TCTATGATTT TGATGTTCCT
GTGATCTTAG GCGATCACGT TACCGTCGAT TCGGGTACCG GTGTAGTACA CACAGCCCCT
GGTCACGGTC AGGATGACTT TGTTGTCGGA CAGAAGTACG GTCTGGAAGT GGCCAACCCT
GTCGGTGACA ATGGCGTGTA TAAGGCTGAT ACAGAGATAT TTGCAGGTCA GCATGTATTT
AAGGCAAACG ATAACGTCGT AGCGCTTCTT GAAGAGAAGG GCGCCTTAAT CAAGCATGAA
AAAATCATGC ATAGTTATCC GCATTGCTGG CGTCATAAGA CTCCAATCAT CTTTAGAGCC
ACACCACAAT GGTTTATCTC TATGGATCAA AAGGGGCTAA GAAAGCAAGC GCTTGGTGAG
ATTGAGCAGA CTCAGTGGAT CCCTGATTGG GGTCAGAGCC GAATTGAAAA AATGGTTGAG
AATCGTCCGG ATTGGTGTAT CTCTCGCCAA CGTACCTGGG GCGTACCTAT TACACTGTTT
GTTCACCGTG AAACTGAAGA GTTACACCCG GATAGTATCT CTTTGATGGA GCGTGTTGCC
AACAGGATCG AACGGGAAGG TATTCAAGCC TGGTGGGACC TTGATGCTCA AGAGCTTCTT
GGTGATGAAG CCGAACAGTA CCGTAAAGTG ACCGACACAT TGGACGTATG GTATGACTCT
GGGTCCTCTT TCTCGTCGGT TGTAGCCTCA CGTCCTGAGT ACCAAGGTCA TGAGATCGAT
CTTTATCTGG AAGGTAGCGA TCAGCATCGT GGCTGGTTTA TGTCTTCATT GATGATTTCG
ACTGCTATGA ATGGCAAAGC ACCTTATAAG CAAGTGCTTA CTCACGGGTT TACCGTGGAT
GGCAACGGCC GTAAGATGTC AAAATCTATC GGTAATGTTA TTGCGCCTCA AACTGTGACG
AATAAGTTAG GTGCCGATAT CCTGCGTTTA TGGGTAGCAG CGACCGATTA TAGCGGTGAG
ATGACGGTAT CTGATGAGAT CTTAAAACGT AGTGCCGATG CCTATCGTCG TATTCGTAAT
ACTGCACGAT TCCTGCTTGC TAACATCAAT GGTTTCGATC CTGTTAACGA TCTCGTGGCC
GTTGAAGAGA TGGTTGCTCT GGATCGCTGG GTAGTGCGCC GCGCAGCTGC ACTGCAAGAA
GAGCTGATTG AAGCTTACGA GCAGTATAAC TTCCACGTGG TAACACAGAA GTTAATGCAG
TTCTGTTCCG TTGAGCTCGG TAGCTTCTAT CTCGATATCA TTAAAGACAG ACAGTACACA
GCTAAGGGCG ACAGTGTTGC TCGTCGCAGT TGTCAGAGTG CGCTTTACTT GATCTCTGAA
GCTATGGTGC GCTGGATTGC GCCAATCTTA AGTTTCACCG CAGATGAAAT TTGGCAGCTA
CTACCGGGTG AGCGTGAGAA ATATGTCTTC ACTCAAGAGT GGTACCAAGG GCTTGAGTCT
GTGACACTTG ATTCAGACCT GAGTGACGAG TATTGGGAAC AGTTGCTAAC TGTCCGTGGC
GAAGTAAATA AAGTCATCGA ACAAGCTCGA CGCGAGAAAC AGATTGGTGG TTCTCTGGAA
GCTGAAATTA CCTTATATGC GGACGATGCA TTGTCACAAG CATTAGCGAC ATTAGGTGAT
GAGCTAAGAT TCGTCCTATT GACCTCAAAA ACTCAGATCG TTGCACTATC ATCTGCTCCT
GCTGACGCTA TCGAAACCGA AATGACATCG TTAAAGCTGG GATTACATAA AGCAGAATCT
GAGAAGTGTG AACGTTGCTG GCATCACAGA GAAGACGTTG GTCAAGTGGA AGCGCATCCA
ACGCTTTGTA CTCGTTGTGT GACCAATATT GAAGGTGACG GTGAAGTTCG TCAGTTTGCT
TAA
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| Protein sequence | MSDYKSTLNL PETEFPMRGN LANREPVMLK SWTEDGLYQQ IRDSRIGRKP FILHDGPPYA
NGSIHIGHSV NKILKDIIVK SKTLSGFDAP YIPGWDCHGL PIELKVEQKV GKPGHKVTAA
QFREKCREYA AKQVDGQRED FIRLGVFADW NKPYLTMDFD TEANIVRSLA KVIDSGHLHK
GVKPVHWCTD CGSALAEAEV EYEDKKSPAI DVAFAATDKA ALLAKFDVQD CTGSASMVIW
TTTPWTLPAN RALSVSPELD YVLVEFVKDG ATSTVILADA LVESCMERYG VESHKALGKA
KGQELELLRF NHPFYDFDVP VILGDHVTVD SGTGVVHTAP GHGQDDFVVG QKYGLEVANP
VGDNGVYKAD TEIFAGQHVF KANDNVVALL EEKGALIKHE KIMHSYPHCW RHKTPIIFRA
TPQWFISMDQ KGLRKQALGE IEQTQWIPDW GQSRIEKMVE NRPDWCISRQ RTWGVPITLF
VHRETEELHP DSISLMERVA NRIEREGIQA WWDLDAQELL GDEAEQYRKV TDTLDVWYDS
GSSFSSVVAS RPEYQGHEID LYLEGSDQHR GWFMSSLMIS TAMNGKAPYK QVLTHGFTVD
GNGRKMSKSI GNVIAPQTVT NKLGADILRL WVAATDYSGE MTVSDEILKR SADAYRRIRN
TARFLLANIN GFDPVNDLVA VEEMVALDRW VVRRAAALQE ELIEAYEQYN FHVVTQKLMQ
FCSVELGSFY LDIIKDRQYT AKGDSVARRS CQSALYLISE AMVRWIAPIL SFTADEIWQL
LPGEREKYVF TQEWYQGLES VTLDSDLSDE YWEQLLTVRG EVNKVIEQAR REKQIGGSLE
AEITLYADDA LSQALATLGD ELRFVLLTSK TQIVALSSAP ADAIETEMTS LKLGLHKAES
EKCERCWHHR EDVGQVEAHP TLCTRCVTNI EGDGEVRQFA
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