| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1164 |
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| Symbol | tyrA |
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| ID | 5613820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1383603 |
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| End bp | 1384742 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640932013 |
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| Product | bifunctional chorismate mutase/prephenate dehydrogenase |
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| Protein accession | YP_001472903 |
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| Protein GI | 157374303 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0287] Prephenate dehydrogenase
[COG1605] Chorismate mutase |
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| TIGRFAM ID | [TIGR01799] chorismate mutase domain of T-protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00398091 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATGAAA AAACAACGGC TGAACTGGAA AACTTAAGAG GCTTGATAGA TGGTGTCGAT
CAACAGTTGA TCCACCTCTT AAGGAAACGA TTGGATTTAG TCGCTCAGGT TGGCGCGGTT
AAACACGGGG CTGGTCTTCC TATCTATGCG CCACAACGTG AAGCGTCAAT GTTGGCTAAG
CGTCGGGGCG AAGCGCAGAA GATGGATGTC TCTCCTCAAC TGATTGAGGA TATATTGAGA
CGCTTGATGC GTGAGTCCTA CCTCAATGAG AAGGATGTTG GCTTTAAACA AGTGAATCCG
GATCTTGGTC ATGTGGTCTT GGTCGGAGGA GAGGGAAAGC TAGGTGGTTT ATTCGCTCAA
ATGCTGACGT TATCCGGATA TCAGGTCAAA GTGCTGGATA AAGATGACTG GTGCAGAGCG
ACAGAAATTT TCGATGGAGC CGGGTTGGTG ATAGTCACTG TCCCTATCGC TATCACATGC
TCTCTGATAA AAGAGAAACT TACCCAGCTA CCACAAGATT GTATTCTTGC CGACCTGACC
TCTATTAAGG GAGAGCCTGT TAATGCAATG CTGGAGGCGC ATAAAGGTCC TGTAGTCGGT
TTACACCCAA TGTTTGGACC CGATGTCGGT AGCTTAGCTA AACAGGTGGT CGTGGTATGT
CATGGTCGTC GGAGTCAAGA TTATCAATGG CTGCTCGAAC AGATACAGAT CTGGGGAGCC
CGTCTCGTAG AAGCCGAGCC TGAGCGTCAT GATAAGGCGA TGCAACTGGT TCAGGCTATG
CGCCACTTCT CCTCCTTCGT CTATGGGTTT AACCTCTACA AAGAGGAGGC AGACATTGAG
TCTCTGTTGC AGTTTAGCTC ACCCATCTAT CGACTCGAGC TGGCGATGGT GGGTCGACTC
TTTGCGCAAA GTCCGGAGCT GTATGCGGAT ATTATCTTTG CCCAAAAAGA GAGTCTTAAA
GCAATCGGGG ATTATTTAGA TAATTATTCT CAGGCTCTGT CATTGCTGCA ATCGGGTGAT
CGCGAGGCGT TTGTGTCTCA GTTCAAAGAG GTTGCACAAT GGTTTGGAGA TTTTGCTCCT
CAATTCCAAC GCGAGAGCCG GGCCATGTTG CAGTCGGTTA ATGATATGAA GACTGACTAA
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| Protein sequence | MNEKTTAELE NLRGLIDGVD QQLIHLLRKR LDLVAQVGAV KHGAGLPIYA PQREASMLAK
RRGEAQKMDV SPQLIEDILR RLMRESYLNE KDVGFKQVNP DLGHVVLVGG EGKLGGLFAQ
MLTLSGYQVK VLDKDDWCRA TEIFDGAGLV IVTVPIAITC SLIKEKLTQL PQDCILADLT
SIKGEPVNAM LEAHKGPVVG LHPMFGPDVG SLAKQVVVVC HGRRSQDYQW LLEQIQIWGA
RLVEAEPERH DKAMQLVQAM RHFSSFVYGF NLYKEEADIE SLLQFSSPIY RLELAMVGRL
FAQSPELYAD IIFAQKESLK AIGDYLDNYS QALSLLQSGD REAFVSQFKE VAQWFGDFAP
QFQRESRAML QSVNDMKTD
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