| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1162 |
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| Symbol | rplS |
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| ID | 5613818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1381735 |
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| End bp | 1382088 |
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| Gene Length | 354 bp |
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| Protein Length | 117 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640932011 |
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| Product | 50S ribosomal protein L19 |
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| Protein accession | YP_001472901 |
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| Protein GI | 157374301 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0335] Ribosomal protein L19 |
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| TIGRFAM ID | [TIGR01024] ribosomal protein L19, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000263892 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAACA TCATTAAAAT GCTCAACGAA GAGCAAATGA AGCAAGATGT ACCAGAATTT
GGTGCAGGTG ACACAGTAGT TGTTAAAGTA CGTGTTGTAG AAGGCGGTAA AGAGCGTCTA
CAGGCATTCG AAGGCGTTGT AATCGCTAAG CGTAACCGTG GCGTTCACTC TGCATTCACA
GTACGTAAGA TCTCTAATGG TGAAGGTGTT GAGCGTGCGT TCCAGATTCA CAGCCCAATC
ATCTCTAGCA TCGAAGTTAA GCGTCGCGGC CGTGTTCGTC GTGCTAAGCT TTACTACTTA
CGTGAGCGTT CAGGTAAGTC TGCACGTATC CGTGAGAAGC TAGCTACTAA GTAA
|
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| Protein sequence | MNNIIKMLNE EQMKQDVPEF GAGDTVVVKV RVVEGGKERL QAFEGVVIAK RNRGVHSAFT
VRKISNGEGV ERAFQIHSPI ISSIEVKRRG RVRRAKLYYL RERSGKSARI REKLATK
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