| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1152 |
|---|
| Symbol | acpS |
|---|
| ID | 5610373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sediminis HAW-EB3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009831 |
|---|
| Strand | + |
|---|
| Start bp | 1372006 |
|---|
| End bp | 1372404 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640932001 |
|---|
| Product | 4'-phosphopantetheinyl transferase |
|---|
| Protein accession | YP_001472891 |
|---|
| Protein GI | 157374291 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0736] Phosphopantetheinyl transferase (holo-ACP synthase) |
|---|
| TIGRFAM ID | [TIGR00516] holo-[acyl-carrier-protein] synthase
[TIGR00556] phosphopantethiene--protein transferase domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGTTG GTCTAGGTAC CGATATCGTC GAGATAGAAC GTATCGAGCA AAAAGTACCG
CAAGCTGGCG ATCATGAGGC TCTGGCTAAA TGCCGCCTGG CCAAGCGCGT GCTGACGGAA
TCTGAAATGG CGATATTTGT CGCCTCATCA AAGCCCGGAC GTTACCTGGC CAAGCGCTTC
GCCGCTAAAG AGGCTGCAGC AAAGGCCTTA GGCACCGGCA TTGGCCGCGG CGTCTCGTTT
CAACATATCG AAATAAGTAA TGATGCTAAT GGTGCCCCTC AGGTTAATTT CAGCGGTGGG
GCGGCTGAAA GGCTCGCCCT TCTTAGTGGC GTTCGCGGGC ACCTCTCGAT TGCCGATGAG
AAGCACTACG CGACAGCAAC AGTCATTCTT GAGTCTTAG
|
|---|
| Protein sequence | MIVGLGTDIV EIERIEQKVP QAGDHEALAK CRLAKRVLTE SEMAIFVASS KPGRYLAKRF
AAKEAAAKAL GTGIGRGVSF QHIEISNDAN GAPQVNFSGG AAERLALLSG VRGHLSIADE
KHYATATVIL ES
|
|---|
| |