| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1151 |
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| Symbol | |
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| ID | 5610372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1371193 |
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| End bp | 1371930 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640932000 |
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| Product | pyridoxine 5'-phosphate synthase |
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| Protein accession | YP_001472890 |
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| Protein GI | 157374290 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0854] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00559] pyridoxine 5'-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGTA TTTTACTGGG TGTTAATATT GATCACATCG CGACCTTACG TCAGGCCCGT
GGAACGTCGT ATCCGGATCC TGTGCATGCC GCTGCGGTTG CTGAACATGC CGGAGCCGAG
GGGATCACGG TTCATCTGCG TGAAGACAGA CGTCACATCA TAGACCGTGA TATCTACCTG
TTGGCCAAAA CATTAAAAAC ACGCATGAAT TTTGAGATGG CTGTAACAGA TGATATGCTC
GATATCGCCT GTGAAGTTAA ACCTACTTAC GTGTGTCTGG TACCCGAGAA ACGTGAAGAA
CTCACCACCG AAGGCGGCTT AGATGTTGCC GGTCAGATGG GCAAGATTGA AGCCGCTATT
CGTCGTCTAA GCGATGTCGG TGTTAAGGTA TCGCTATTTA TCGATGCCGA TAAAACTCAA
ATTGATGCCG CTGTTGCTGT TGGTGCCCCG CTGATTGAAA TCCACACAGG CTGTTACGCC
GATGCCGAAA ATGAAGCCGA AGAGGCTAAA GAGCTGTCAC GTATCACCGA AATGGCCAAA
TACGCTCACT CTAAGGGGTT AATCGTCAAT GCCGGCCATG GACTTCACTA CCATAACGTT
AAGCCGATAG CTGCGATCCC AGAGCTTTAT GAGCTTAACA TCGGCCATGC AATTATCGCC
CGCGCCGCTA TCGATGGTCT GGCGACAGCC GTTAAAGATA TGAAGCAGCT GATGAACGAA
GGTCGCAGAG GCGAATAA
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| Protein sequence | MSRILLGVNI DHIATLRQAR GTSYPDPVHA AAVAEHAGAE GITVHLREDR RHIIDRDIYL
LAKTLKTRMN FEMAVTDDML DIACEVKPTY VCLVPEKREE LTTEGGLDVA GQMGKIEAAI
RRLSDVGVKV SLFIDADKTQ IDAAVAVGAP LIEIHTGCYA DAENEAEEAK ELSRITEMAK
YAHSKGLIVN AGHGLHYHNV KPIAAIPELY ELNIGHAIIA RAAIDGLATA VKDMKQLMNE
GRRGE
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