Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_1132 |
Symbol | |
ID | 5613767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 1352758 |
End bp | 1353276 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640931981 |
Product | dinucleoside polyphosphate hydrolase |
Protein accession | YP_001472871 |
Protein GI | 157374271 |
COG category | [L] Replication, recombination and repair [R] General function prediction only |
COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000912913 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTGATA GTGACGGCTT TCGCGCGAAT GTGGGCATCA TTATCTGTAA TCGCTTTGGG CAGGTTATGT GGGCTAGAAG ATTTGGTCAA CATTCCTGGC AATTTCCTCA GGGTGGGGTC GATGAAGGCG AAACACCTGA AGAGGCGATG TTTAGAGAGT TGTATGAAGA GGTTGGATTA AGGCCTGAAC ATGTTCAGAT ATTAACTTCT ACCCGCTCTT GGTTACGTTA CAGATTACCC AAACGTTTAA TAAGGCAAGA TAGTAAGCCT GTGTGTATTG GGCAGAAGCA AAAATGGTTT TTGTTACAGC TTAAGAGTAA TGAGAGTGCG ATTGATTTGA ATGCTTGTGG TCATCCTGAG TTTGATGACT GGCGTTGGGT GAGTTATTGG TATCCGGTGC GACAGGTTGT GTCATTTAAA AGAGATGTTT ATAGAAAGGT GATGAAAGAG TTCGCTCCTA CGGCACTCCC ATTTCAAACT AGGGAACATC ACCATAGCAG GAGAGGCAGA CGACGTTAG
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Protein sequence | MIDSDGFRAN VGIIICNRFG QVMWARRFGQ HSWQFPQGGV DEGETPEEAM FRELYEEVGL RPEHVQILTS TRSWLRYRLP KRLIRQDSKP VCIGQKQKWF LLQLKSNESA IDLNACGHPE FDDWRWVSYW YPVRQVVSFK RDVYRKVMKE FAPTALPFQT REHHHSRRGR RR
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