| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1130 |
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| Symbol | |
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| ID | 5611485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1350023 |
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| End bp | 1351096 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640931979 |
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| Product | putative adenylate/guanylate cyclase |
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| Protein accession | YP_001472869 |
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| Protein GI | 157374269 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000248184 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAGCAC GTATACAAGC AAAAAAACTA ATTTTTGCGA TTTTCGCTTG GGGAATTGCC
ATGGCGGCGT TTGTGTTTTT TCGATATGCA CAAGCACCCG AACTTCCACA ATGGGCAACC
GGCAGTGTAG ATCTCGCCAC ACTAGCTATC TATATGGGAT TCATCTTCGG TAGTTTACAT
TGGATGTCTA ACCTGATTGC CGACTTTAGC GCGATAAACC GACTTCCCTA TATATTCTCT
GTTATCTTCA AAGGCCTATT CCTTCTGCTT GGGGCGACCA CTCTTGCTTA TATAACCCAA
TTCCTGAATA TGTGGGCTAT AGAAAATCAC ATGGCCACCT TGAGGCAGAT GTTAACGGCT
CATATACTTT ACAGTCCGTC ATTTCAGGCA CTAATTATAT ACTTAGTTGT AGTTAGAGTG
GGTTTAGCCT TCATCGAACA GATGGCGCTG TTAGTAGGAC CTCGTGTATT ACTCAATATT
GGCCTTGGAA AATACCATAA ACCGAGATAC GAACAGAGGT TATTCCTCTA TCTGGATATG
GTTGCCTCAA CGACCCATGC AGAATCATTA GGCGACTATC GATTCAGCCG TTTAATACAA
GATAGTTTCA GCCTTCTTGC CGATACTGTA ACTAATAATG AAGCCGAAAT TTATCGTTAT
ATGGGCGATG CAGTCTTAAT ACATTGGCCG CTCGAAGACG GGATCCTTAA AGATAGAAGT
TTCAATATCT ACTATGAATT CAGTCAGCAA CTCAATTGGC AACGTCAGTA TTTCGAAGAG
CAATATGGTT TTGTTCCTAA GTTCAAAGCC GCTGCTCATT GTGGTCAAGT CGTCGCCGCC
GTAGTCGGAG TTCAGAAACA GGAGATTAGT TTCTTCAGTG ACGTACTCAA CACATTGGCG
AGATTACAAG ATCAATGCAA CCCTCTCGGG CAGAGAATGC TTATCTCTGG CGCACTGGAA
TCCAGAATTG AGAAAGATAA CAGCCTGTAT GTTCTAAACA ACTTAGGCCC GATTAAGTTG
AAGGGGAAAC AACATTCGAC TGAAGTCTAT GGTGTTTCTC CTAAACGCGG ATAA
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| Protein sequence | MKARIQAKKL IFAIFAWGIA MAAFVFFRYA QAPELPQWAT GSVDLATLAI YMGFIFGSLH
WMSNLIADFS AINRLPYIFS VIFKGLFLLL GATTLAYITQ FLNMWAIENH MATLRQMLTA
HILYSPSFQA LIIYLVVVRV GLAFIEQMAL LVGPRVLLNI GLGKYHKPRY EQRLFLYLDM
VASTTHAESL GDYRFSRLIQ DSFSLLADTV TNNEAEIYRY MGDAVLIHWP LEDGILKDRS
FNIYYEFSQQ LNWQRQYFEE QYGFVPKFKA AAHCGQVVAA VVGVQKQEIS FFSDVLNTLA
RLQDQCNPLG QRMLISGALE SRIEKDNSLY VLNNLGPIKL KGKQHSTEVY GVSPKRG
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