| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1121 |
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| Symbol | |
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| ID | 5611609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1335847 |
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| End bp | 1336452 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931970 |
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| Product | transcriptional regulator BetI |
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| Protein accession | YP_001472860 |
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| Protein GI | 157374260 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | [TIGR03384] transcriptional repressor BetI |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCGCC CGCCAATGAA AGCCGTCAGA CAACAACAGC TAATCGATGC AACCTTGGTC
TCTGTTGAAC GTCATGGTCT ACACAATACA ACGATCAACA CCATCAGTGG CTTGGCAGGA
TTATCATCAG GGCTAATCAG CCATTACTTC GGCGGTAAAC AAGGCTTAAT TGAAGCGACA
CAAAAATACC TGCTAGACCA ACTCAAACAA GCGTTATTGA GTCGTACAGT GGGCAAAACC
ATGCTCCCGC TTGAGAGATT ACATGCCATT GTTGATGCCA ACTTTACCGA GCTGCAGCGC
TCAAGACCGG CAACAAAAAC CTGGCTGAGC TTCTGGTCAC AAGCCATGCA TGAGCAAGGA
CTTGCCAGAT TACAGCATAT CAATAGTCAA CGATTGTATA GCAACCTTTT GTTCTCTTTT
AAAAAATTAC TTCCCCAAGC CCAAGCCATC ACCGCAGCTA AGCAGACTGC TGCGATGATC
GATGGCTTTT GGCTACGCAG TGCATTAAGC CCTGCACCAG AAAAAGAGTT CGAACAGGCC
CAAATTTTAT GTAAAGCCTT CATCGAGGCA GTGATCATGC AGTACGGAGA AAATCGATGT
CGTTAG
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| Protein sequence | MPRPPMKAVR QQQLIDATLV SVERHGLHNT TINTISGLAG LSSGLISHYF GGKQGLIEAT
QKYLLDQLKQ ALLSRTVGKT MLPLERLHAI VDANFTELQR SRPATKTWLS FWSQAMHEQG
LARLQHINSQ RLYSNLLFSF KKLLPQAQAI TAAKQTAAMI DGFWLRSALS PAPEKEFEQA
QILCKAFIEA VIMQYGENRC R
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