| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1112 |
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| Symbol | |
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| ID | 5611845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1325930 |
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| End bp | 1326556 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640931961 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472851 |
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| Protein GI | 157374251 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2860] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGT GGATCTACTT TTTCGATCTG TGTGGTACCG CCGTTTTTGC GCTCTCCGGT
GCACTCGCTG CGGGCCGCCA TCGGATGGAC CCCTTCGGCG TAATAGTATT AGCCTCGGTC
ACAGCAGTGG GCGGCGGCAG CATTCGTGAT GCCCTGCTGG GAACGACTCC GGTTTTTTGG
ATCCGCGACC CCAACTACAT CATCGTCATA TTGATCACTG TGCTTCTGAC CATGCTATTG
GTGCGAAAGC CTAAGAAAGT CCCACAGCAT ACCTTACCCA TAGCCGATGC ATTAGGACTC
GCTCTTTTTA CCGTGATTGG TGCCGAGAAG GCTCTCAGCC TCGAGTTAGG TGGCATGATA
GCCGTGGTCA TGGGCTTGAT AACTGGTGTC GGAGGAGGCA TTATTCGAGA CTTGTTGTGT
CGACAAATAC CTATGATCTT AAGGACCGAA ATATATGCAA CCGCATCTAT CTTAGGCGGG
ATCTGCTACA GCCTGAGTAT TCACTTAGGG GCCGTCGACA AACAAGCCTT GGTGCTTGCG
ATTATCGTAG CGTTGGCCAT CAGGCTGGCC GCGATAAAAT GGCACCTTTC TCTACCTGCA
TTTGATCTGA AGACGAACAA ACAATGA
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| Protein sequence | MSEWIYFFDL CGTAVFALSG ALAAGRHRMD PFGVIVLASV TAVGGGSIRD ALLGTTPVFW
IRDPNYIIVI LITVLLTMLL VRKPKKVPQH TLPIADALGL ALFTVIGAEK ALSLELGGMI
AVVMGLITGV GGGIIRDLLC RQIPMILRTE IYATASILGG ICYSLSIHLG AVDKQALVLA
IIVALAIRLA AIKWHLSLPA FDLKTNKQ
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