| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1099 |
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| Symbol | |
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| ID | 5612101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1302713 |
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| End bp | 1305289 |
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| Gene Length | 2577 bp |
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| Protein Length | 858 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640931948 |
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| Product | peptidase S9 prolyl oligopeptidase |
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| Protein accession | YP_001472838 |
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| Protein GI | 157374238 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00716839 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCTCGAA TGTCCATCTT TATGTATTCC CTGATAGCTT TTTTTAGCGC ATCTGGCATT
GCAGCCGAAT ACCAAACTCC CTCTCAACCG CTTAAAGAGG TTGTAGAGCA GAAAAAAAAG
GTAAGTACTC GCTTATCGAA TAACAGGCAG TGGTTGGCGA TACTCACGCC TGAGTCACAT
ACAGATATCG AAAACTTAGC CAGAAAAGAA CTTAAATTAG CGGGCCTGAG GTTATCACCC
AATCGACTGA CCCCAAGCCG AATCAAGGCC AAGTATCTTA GTATCGAGTT GGTCAATTTA
GACAATGACT CGGTAAAGAG AGACACCATT CTCACACCAG CGGATCTGAC CGTCACTAAG
GTGCAATTTT CTCCCGATAG CCGTTTTATC AGCTATATCG GAATATCAAA TCATGGCGCC
GACCTCTACC TATACGAGAT AGCGACTCGT CAAAGCTTCA AACTAAGCAA GAGCCGTATC
AACGCCAGTC TGGGACTTAA ATACCAATGG CTGCATAATA GCCAGGGCAT AGCAACCAGC
ATTGCCATCG ATAGTGAACA CTCACCTCAG ACGCCTCAAC TTCATGGGCC AAACATCAGT
ATCACTCAAG GTAAAAAAGC GCCGAGACGA ACCTATCAGG ATCTATTGAA GAATGCACAG
GACGAAGCAC AATTCAGTCA ACTGACCACC AGCCAACTGA GTATCATAAT GCTCGATGGT
CAGGTAATAA AAATCGGTAA GCCTGCAATT AACATCGGCT TTAGTCTTTC TCCCGATGAT
AAGTACGTGC TGGTGAAGCG CATCAAGCCC CCCTTCTCTC ATATGGTAAA GTATCGTGAT
TTTGCCCAAT CAGTGGAGAT GTTCCATAGC TCCGGAGAAA AACTCACTAC CCTGGCCGAG
CTTGAAAGTG GTGAGTTTCG ACCTTCCGGC AGCGACTCCG TCAGAAAGGG CCCCAGATTA
ATTCACTGGC GCAGCGATAA ACCCAATACT CTCGCCTATG TCGAGGCGCT CGACGGGGGT
GACAGCAACA AAAAAGCGCA ATACCGGGAT CAACTACGAC AAATCAGCGC TCCCTTTAAC
CTTGCGCCTA AAGCCTTAGT GAAAACCCCA TGGCGAATTG CAAACGTTCA ATGGGGCGAA
GAGCGACTCG CACTCATCAC GGAGCGGAAC TCGAAGAATA AACAGATGAG GGTCAGCTTC
CTGGACACAG AGTCTGGATC TGATAACTCT GTTTCTGGCA ATTCTGTACC AGAGCAGAGC
ACTGCGATGC GCCTCTGGTA CCAAAAGGCA CTCAGGGACA GCTACAGCGA TCCCGGTCGT
CTCTATAAGC ACACCCGCCC ATCAGGGCTA GGGCATCTTT TCGCCGTCGA TAATCAAAGC
GTGCTCCATT ATGGATTGGG CGCCTCACCT GAAGGCTATC AGCCTTTCCT GAGAATGACG
AAGGTTCCGC TAAAAGATGA AGGGGCAGAT ACTTATCTTG ATAAGAGGGT AGGCAAAGAG
GCCGTTAGCC AAGCCGCATC TACACGCACT ACGACCAACT CTACAACACT GTGGCGTTCG
GCAAGTAACA AGCTGGAAAG CGTTCGCTAT CTGCTCAATC GTAAACCGCT CAGGCTCATC
ATCAACAGAC AATCGAGCGA TACGCCATCG CACTTAGTCC TGCTCGACGT CCAAGCCGGA
ACGGAGCGGG TACTGCAGCC AAAAACAGCC GAGATAACCG CGTTCAAAGG CGTTAGCCGA
CAACTGGTGA CCTACACGAG AGATGATGGC TTACCTCTAT CTGGTAATCT CTACCTACCT
GCCGGCTATA CAAAAAAAGA TGGTCAGCTT CCGGTTTTGA TGTGGGCTTA CCCCAGAGAA
TACAAGAATG CGGAGGTGGC CAGTCAGGTC AACTACTCTC CCAACCAATA CAACTATATC
AGCGCCAAGG GCCCGGTCCC CTTCGTTGCC AATGGGTTTG CCGTGTTCGA TAGGGTAGCA
ATGCCCATCG TAGGCGAAGG AAAAGAGAAG CCTAACGATA ACTTCCGTAG TCAACTCATC
GCTAATGCCA AAGCGGCAAT CGACACCTTA GTCGAGATGG GCGTCGCCGA CAGAGACAAA
GTTGCAATCG GCGGTCACTC CTATGGCGCC TTCATGGTCG CCAACCTGTT AGCTCATTCG
GATCTGTTTG CCGCTGGCAT AGCCAGAAGT GGTGCCTATA ACCGCACCTT GACTCCATTT
GGCTTTCAAA ATGAGAAACG TAACTTCTGG GAGGCACCGA GCCTGTATCA GCAGATATCC
CCTTTCACCC ATGCCGATAA GATTGATGAA CCACTACTGC TGATGCACGG CGAGATGGAT
GCCAACTCGG GCACTTACCC CATGCAATCG GCCAGACTGT TTAAAGCGAT TAGAGGCCTG
GGTGGCAATG CCAGACTGGT CACCTTTCCA TTCGAGAGTC ACAGCTATCA GGCCAAAGAG
TCTCTGATGC ATATGCTATG GGAACAGGAA AACTGGTTAG ATCAACACCT GCGGATTAAA
AGTAAAACTA AAAATAAAGA TGAGACAGCT TTGGATACCC GCGTCTCGTT CCATTGA
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| Protein sequence | MSRMSIFMYS LIAFFSASGI AAEYQTPSQP LKEVVEQKKK VSTRLSNNRQ WLAILTPESH
TDIENLARKE LKLAGLRLSP NRLTPSRIKA KYLSIELVNL DNDSVKRDTI LTPADLTVTK
VQFSPDSRFI SYIGISNHGA DLYLYEIATR QSFKLSKSRI NASLGLKYQW LHNSQGIATS
IAIDSEHSPQ TPQLHGPNIS ITQGKKAPRR TYQDLLKNAQ DEAQFSQLTT SQLSIIMLDG
QVIKIGKPAI NIGFSLSPDD KYVLVKRIKP PFSHMVKYRD FAQSVEMFHS SGEKLTTLAE
LESGEFRPSG SDSVRKGPRL IHWRSDKPNT LAYVEALDGG DSNKKAQYRD QLRQISAPFN
LAPKALVKTP WRIANVQWGE ERLALITERN SKNKQMRVSF LDTESGSDNS VSGNSVPEQS
TAMRLWYQKA LRDSYSDPGR LYKHTRPSGL GHLFAVDNQS VLHYGLGASP EGYQPFLRMT
KVPLKDEGAD TYLDKRVGKE AVSQAASTRT TTNSTTLWRS ASNKLESVRY LLNRKPLRLI
INRQSSDTPS HLVLLDVQAG TERVLQPKTA EITAFKGVSR QLVTYTRDDG LPLSGNLYLP
AGYTKKDGQL PVLMWAYPRE YKNAEVASQV NYSPNQYNYI SAKGPVPFVA NGFAVFDRVA
MPIVGEGKEK PNDNFRSQLI ANAKAAIDTL VEMGVADRDK VAIGGHSYGA FMVANLLAHS
DLFAAGIARS GAYNRTLTPF GFQNEKRNFW EAPSLYQQIS PFTHADKIDE PLLLMHGEMD
ANSGTYPMQS ARLFKAIRGL GGNARLVTFP FESHSYQAKE SLMHMLWEQE NWLDQHLRIK
SKTKNKDETA LDTRVSFH
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