| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1094 |
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| Symbol | |
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| ID | 5612180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1298660 |
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| End bp | 1299499 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640931943 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472833 |
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| Protein GI | 157374233 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00105503 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00393071 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCAAATT ATCATCGTTG GATCGATCGC ATGCAAGTGA TTGAGCGGAA GTTCCGGCCA
TCCAGCCTGT ACCTGTGCCT GTTGGTGTTA GTCGCTTTTA CCTTAGGTGG GGTGAGCTAC
AACCTGTGGT CTGAACATAA TCTGCCTGTA GTAAAGAGTA ACACAGAACA GACAGATACA
TTGGTTAAAC AGTTGAAAAG TCAGGCTCAA GTCATGGCTT CTAAAAATCT CGAACTTACG
ATTGAGAAAG AAGCGAATGA CAAGATGCAA CAGCTGTTTT CTGTCCAGCA TAAAAAGCAG
CGTGAACTCG AGAGAGAGCT CTCTTTTTAT CGCAGTATTA TGGCACCTGA AAATAACGCC
GATGGCGTAT CCATCAATGG GCTGGAGCTA ACGCCAAACC TGTTGCCAAG GCAATATCGG
GTGAAGCTGA TTTTAACGCA ACTTAAAAAG CGTAAACAAT CACTCAAGGG TAAGGCTGAG
ATTAAGCTTG TGGGTGTGCA GGACGGTGAA GCGGTAGAGT TAGATTTGGC TAAGCTTACC
AATGTGCAAC TTTCCTTTAA ATTCCGTTAT TTTCAAATCT TAGATGCCGA GTTTACCCTG
CCGGAAGGGT TTGAGTTATC TCATCTTAAG ACTAAGGTTA TTGTCCCTTC AAGCCGCTGG
ACCAAAGGGT CACAGGCCGA AGTCGAGTTT GCTGCTGTGG ATCTGTTACC ATCTAAAGCT
CCCTCGGTTA AGCCATTTTC TGAACTTCAG GAAGCTGTTG TAGAAGAGAA GCTTGAAGAG
GTCATTGAAG ATGAGCCTGA AGTCAGTGCG CCTTTATCGG CCGGAGAAAC GGTAAAGTAA
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| Protein sequence | MPNYHRWIDR MQVIERKFRP SSLYLCLLVL VAFTLGGVSY NLWSEHNLPV VKSNTEQTDT
LVKQLKSQAQ VMASKNLELT IEKEANDKMQ QLFSVQHKKQ RELERELSFY RSIMAPENNA
DGVSINGLEL TPNLLPRQYR VKLILTQLKK RKQSLKGKAE IKLVGVQDGE AVELDLAKLT
NVQLSFKFRY FQILDAEFTL PEGFELSHLK TKVIVPSSRW TKGSQAEVEF AAVDLLPSKA
PSVKPFSELQ EAVVEEKLEE VIEDEPEVSA PLSAGETVK
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