| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1092 |
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| Symbol | |
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| ID | 5612178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1295679 |
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| End bp | 1296239 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640931941 |
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| Product | NAD(P)H dehydrogenase (quinone) |
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| Protein accession | YP_001472831 |
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| Protein GI | 157374231 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2249] Putative NADPH-quinone reductase (modulator of drug activity B) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.989179 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0147491 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAAAG TAGTCATAAT TTCGGGTCAC CCCAACCTTA ATGAATCGAT GGCGAATTCA
AAAATAATCC AGATTCTCGG CGCATTAAAT AACACTCATG TACGTTGTCT CGATGACTTA
TATCCAGATT ACAAGATTGA TATTCCAGCC GAGCAGGCCG CGCTGATCGA CGCCGACCTG
ATTATTTTTC AATTCCCTCT CTACTGGTCG ACATATCCGG CCATAATGAA GAAGTGGTTC
GATGATGTAT TCACCTATAA CTTCGCCTTC GGTCCCGAGG GAGATAAGTT AAAAAACAAG
AAAGTGATAC TCTCTATCAC AGCAGGTGCA ACGGCAGAGT CTTATAGCGA AGGGGATTTT
AACTTTATGC CTCTGGACGA TTACCTGGAG TCTGCACTTC ACCCACTCAA GGCCGCTCAG
GTCGATCTGG TAGACAGTAT CGTTACTTTT AATATGAACT CAGATACCAA CGAAGGGGGC
AATGTCGATA CCGTCAACCG TCTCGTCGTC GAACATGCAG ATAGGGTCAA GGCAGCGATA
TCCCACACGA TTAATCGCTG A
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| Protein sequence | MSKVVIISGH PNLNESMANS KIIQILGALN NTHVRCLDDL YPDYKIDIPA EQAALIDADL
IIFQFPLYWS TYPAIMKKWF DDVFTYNFAF GPEGDKLKNK KVILSITAGA TAESYSEGDF
NFMPLDDYLE SALHPLKAAQ VDLVDSIVTF NMNSDTNEGG NVDTVNRLVV EHADRVKAAI
SHTINR
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