| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1077 |
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| Symbol | |
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| ID | 5612998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1279100 |
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| End bp | 1279702 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640931926 |
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| Product | putative glycerol-3-phosphate acyltransferase PlsY |
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| Protein accession | YP_001472816 |
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| Protein GI | 157374216 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0344] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.116934 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.142728 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGACCATAA CAACACTCAC TCTGGGAATG ATTTTAGCCG CCTATTTGGC CGGTTCGATC
TCCAGCGCTG TGCTTGTGTG TCGATTGCGT GGCTTACCCG ACCCAAGAAC AGCGGGCTCC
GGCAATCCTG GCGCCACGAA TGTTCTACGA ATAGGTGGCG CAAGCTCAGC CGCCATGGTG
CTCTTTTTTG ATATGCTCAA AGGGGCATTA CCCGCTTACA TCGCATTTAG GTTAGGCATA
GATCAGGTCG CACTCGGCGC TATCGCTATC GCTGCCTGTT TAGGCCATAT TTTCCCCATC
TTCTTTAAGT TTAAGGGCGG AAAAGGAGTC GCAACCGCAT TCGGTGCCAT GGCCCCCATC
GGCCATGAAC TTGCGCTGGC CTTGATGGTA ACTTGGATAG TCATGGTACT CATCAGCCGT
TACTCGTCCC TTGCAGCTAT CACAACGGCA ATGCTCGCCC CCATCTATAC CTGGTTTTTA
GACGAGAGAT TTACCATTCC TGTCGCCATG CTATCGACCT TAATCGTTAT TCGTCACAGG
GATAACATAC ACAGGTTGCT CAAAGGCGAA GAGTCTAAGG TGTCGCGGAA GAAGAAAGGT
TAG
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| Protein sequence | MTITTLTLGM ILAAYLAGSI SSAVLVCRLR GLPDPRTAGS GNPGATNVLR IGGASSAAMV
LFFDMLKGAL PAYIAFRLGI DQVALGAIAI AACLGHIFPI FFKFKGGKGV ATAFGAMAPI
GHELALALMV TWIVMVLISR YSSLAAITTA MLAPIYTWFL DERFTIPVAM LSTLIVIRHR
DNIHRLLKGE ESKVSRKKKG
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