| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1075 |
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| Symbol | rpsU |
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| ID | 5612996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1277337 |
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| End bp | 1277552 |
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| Gene Length | 216 bp |
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| Protein Length | 71 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640931924 |
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| Product | 30S ribosomal protein S21 |
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| Protein accession | YP_001472814 |
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| Protein GI | 157374214 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0828] Ribosomal protein S21 |
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| TIGRFAM ID | [TIGR00030] ribosomal protein S21 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.015227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.70194 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAATAA TTAAAGTACG CGATAACGAA CCATTTGACG TAGCTCTACG TCGTTTTAAG
CGCTCTTGTG AAAAAGCCGG TATCTTAGCT GATGTTCGCG CTCGTGAATT CTACGAGAAG
CCAACTACTG CACGTAAACG TGCTAAAGCC GCTGCAATTA AGCGTCTTGC TAAGAAGCTT
TCTCGCGAAA ATGCGCGTCG CGTACGTTTA TACTAA
|
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| Protein sequence | MPIIKVRDNE PFDVALRRFK RSCEKAGILA DVRAREFYEK PTTARKRAKA AAIKRLAKKL
SRENARRVRL Y
|
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| |