| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1049 |
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| Symbol | rihA |
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| ID | 5612033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1245613 |
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| End bp | 1246551 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640931897 |
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| Product | ribonucleoside hydrolase 1 |
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| Protein accession | YP_001472788 |
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| Protein GI | 157374188 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1957] Inosine-uridine nucleoside N-ribohydrolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACACGCC CAATTATTCT CGATTGTGAT CCCGGACATG ATGATGCAAT AGCGCTCATT
CTCGCCTTAA GCACCGATGC ATTTACCCCA CTTGCAGTAA CGACCAGCGC CGGTAATCAA
ACGCCGGATA AGACCCTGAA CAACGCCTTA AGGGTGTTGA CGTTATTAGG CCGCAGCGAT
ATCCCGGTTG CAGGCGGAGC CCAAAAGCCA TTAGCCAGAG AGTTGATCAT CGCCGATAAC
GTTCACGGCG AAACCGGACT CGATGGTCCT AAACTGCCCG ATCCCGGCTT CGACCCTGTA
TCTATGACAG CCATAGAATT GATGGCGTTA AAACTCAGAG AGAGTCAGGT TCCGGTCACG
CTTGTACCGA CAGGCCCCCT CACCAATATC GCCATCTTGC TCACCAGCCA TCCAGAGCTA
CACGATAAGA TAGAACGTAT CGTCCTGATG GGGGGCGCCG CCGGCGTGGG CAACTGGACC
CCGGCTGCAG AATTTAACAT CTACGTCGAT CCCGAAGCCG CCGATATCGT CTTTAAGTCC
GGCATTCCTA TTACAATGTG CGGCCTGGAT GTCACCCACG AAGCACAGAT CATGGATGAA
GACATAGAGC GGATCCGCGC AATCGATAAC CCTATCGCTT TGTGTGTGGC AGAGCTTCTG
GATTTCTTCA TCGTCTATCA CAGGGATCCT AAGTGGGGCT TTACCGGAGC ACCGCTGCAT
GACCCTTGTA CCATCGCCTG GCTACTTAAG CCGGAACTAT TTCAGGCTCA GGACTGCTGG
GTCGGCATAG AGACAAAAGG CGAGCATACT CAGGGGATGA CAGTGGTCGA CCGCCATCAG
CTCACAGGTC ATGCCGCCAA TGCAACAGTG CTGTTTAATC TGGATAGACA AGGTTTTGTC
GATCTATTAG TCGAGCGTCT GCAGGCATAT AACAGATAG
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| Protein sequence | MTRPIILDCD PGHDDAIALI LALSTDAFTP LAVTTSAGNQ TPDKTLNNAL RVLTLLGRSD
IPVAGGAQKP LARELIIADN VHGETGLDGP KLPDPGFDPV SMTAIELMAL KLRESQVPVT
LVPTGPLTNI AILLTSHPEL HDKIERIVLM GGAAGVGNWT PAAEFNIYVD PEAADIVFKS
GIPITMCGLD VTHEAQIMDE DIERIRAIDN PIALCVAELL DFFIVYHRDP KWGFTGAPLH
DPCTIAWLLK PELFQAQDCW VGIETKGEHT QGMTVVDRHQ LTGHAANATV LFNLDRQGFV
DLLVERLQAY NR
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