| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1041 |
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| Symbol | |
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| ID | 5612832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1236002 |
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| End bp | 1236721 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640931889 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472780 |
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| Protein GI | 157374180 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02001] conserved hypothetical protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0114575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.584816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTATAAAA AATTCAATAA AAAACGGATT GCCCAGGTTA CCGGCCTAAC ATTGGCTGCA
GCGCTAATCT CACCTATGGT ATCGGCAGAA GTATCGGGCG AAATTGGAGT CACCAGTGAC
TACCGTTTTC GCGGGGTCTC ACAGACGGCC GGTGATTTTG CCGTTCAGGG TAGCATCGAC
TACAGCGCCG ATAACGGCTT CTTTGCAGGG GCATGGGCGA GTAATGTTGA TGATGAAAGC
TATGATGCAG ATGTAGAGAT AGACATCTAC GCCGGTTATT GGGGCGCGTT CGGTGAAGAT
GAAGAGTTCG AGTACGATGT CACTCTGACC TATTACACCT ATCCGGGACA AGATGAGAGC
AGTAAATATT TAGAGGCCAA TGTAGGGTTC TACTTTGCGG GTTTCCACCT GGCGCAGTGG
TACACCAACG ATTATGCCAA CGCAGATGTA GACCTTCACT ATACTGAGCT TAACTACTCC
TATGAGTTTA TCGAGAACTG GAGTATCGAT GCCCATGTGG GTTATAGCTA TGGCGATGGT
GCAGACTTAG ATTGGGGAGA AGACTATATG GATTACTCCA TCGGCGTCTC CACAGAGCTT
GCAGGTGTAG GCTTGTCTTT AGCCTGGTTG GATACCAACC TCAGCGACGA TAACATGATT
GATGATGGTC CCTGGAAGAA TGAAGGCACG GTACTGGCCA CCGCCAGTTA CGCATTCTAA
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| Protein sequence | MYKKFNKKRI AQVTGLTLAA ALISPMVSAE VSGEIGVTSD YRFRGVSQTA GDFAVQGSID
YSADNGFFAG AWASNVDDES YDADVEIDIY AGYWGAFGED EEFEYDVTLT YYTYPGQDES
SKYLEANVGF YFAGFHLAQW YTNDYANADV DLHYTELNYS YEFIENWSID AHVGYSYGDG
ADLDWGEDYM DYSIGVSTEL AGVGLSLAWL DTNLSDDNMI DDGPWKNEGT VLATASYAF
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